CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G050939
(
Zea mays
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GRMZM2G050939
T118567_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G050939_P01
C2H2 ZF
111
136
VKCHIEDCKCSFSKKSNLDKHVKAVH
GRMZM2G050939_P01
C2H2 ZF
142
168
FVCQFSGCGKRFSYKHVRDNHEKSSAH
GRMZM2G050939_P02
C2H2 ZF
23
46
YKCGFCDVVRSKKCLLRAHVLEHH
GRMZM2G050939_P02
C2H2 ZF
71
92
ACEQCGMSFKKQAHLKQHMQSH
GRMZM2G050939_P02
C2H2 ZF
98
122
FSCTVDGCPFSYSRKDHLNRHLLTH
GRMZM2G050939_P02
C2H2 ZF
127
152
FVCPVEGCGRKFNIKGNMQRHVQEIH
GRMZM2G050939_P02
C2H2 ZF
164
188
FICPKVNCGKAFKYASKLKKHEESH
GRMZM2G050939_P02
C2H2 ZF
254
279
VKCHIEDCKCSFSKKSNLDKHVKAVH
GRMZM2G050939_P02
C2H2 ZF
285
311
FVCQFSGCGKRFSYKHVRDNHEKSSAH
GRMZM2G050939_P03
C2H2 ZF
23
46
YKCGFCDVVRSKKCLLRAHVLEHH
GRMZM2G050939_P03
C2H2 ZF
71
92
ACEQCGMSFKKQAHLKQHMQSH
GRMZM2G050939_P03
C2H2 ZF
98
122
FSCTVDGCPFSYSRKDHLNRHLLTH
GRMZM2G050939_P03
C2H2 ZF
127
152
FVCPVEGCGRKFNIKGNMQRHVQEIH
GRMZM2G050939_P03
C2H2 ZF
164
188
FICPKVNCGKAFKYASKLKKHEESH
GRMZM2G050939_P03
C2H2 ZF
254
279
VKCHIEDCKCSFSKKSNLDKHVKAVH
GRMZM2G050939_P03
C2H2 ZF
285
311
FVCQFSGCGKRFSYKHVRDNHEKSSAH
GRMZM2G050939_P04
C2H2 ZF
111
136
VKCHIEDCKCSFSKKSNLDKHVKAVH
GRMZM2G050939_P04
C2H2 ZF
142
168
FVCQFSGCGKRFSYKHVRDNHEKSSAH
GRMZM2G050939_P05
C2H2 ZF
111
136
VKCHIEDCKCSFSKKSNLDKHVKAVH
GRMZM2G050939_P05
C2H2 ZF
142
168
FVCQFSGCGKRFSYKHVRDNHEKSSAH
GRMZM2G050939_P06
C2H2 ZF
23
46
YKCGFCDVVRSKKCLLRAHVLEHH
GRMZM2G050939_P06
C2H2 ZF
71
92
ACEQCGMSFKKQAHLKQHMQSH
GRMZM2G050939_P07
C2H2 ZF
23
46
YKCGFCDVVRSKKCLLRAHVLEHH
GRMZM2G050939_P07
C2H2 ZF
71
92
ACEQCGMSFKKQAHLKQHMQSH
Links
Other
C2H2 ZF
family TFs
Other
Zea mays
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb09g002060
Sorghum bicolor
Sb09g002060
N
0.772