CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G344974
(
Zea mays
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GRMZM2G344974
T118617_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RBE
M01858_2.00
Arabidopsis thaliana
NNNASWN
NWSTNNN
PBM
Weirauch et al.(2014)
pTH7538
0.766
0.739
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G344974_P01
C2H2 ZF
54
76
YKCTFCRRGFPTAQALGGHMNVH
Links
Other
C2H2 ZF
family TFs
Other
Zea mays
TFs
165 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb04g037590
Sorghum bicolor
Sb04g037590
I
0.827
Si019563m.g
Setaria italica
Si019563m.g
I
0.827
Pavir.Ab03315
Panicum virgatum
Pavir.Ab03315
I
0.827
BRADI3G55760
Brachypodium distachyon
BRADI3G55760
I
0.817
AMTR_s00022p00139230
Amborella trichopoda
AMTR_s00022p00139230
N
0.798
OB02G44430
Oryza brachyantha
OB02G44430
I
0.779
GRMZM2G000126
Zea mays
GRMZM2G000126
I
0.776
Lus10022206.g
Linum usitatissimum
Lus10022206.g
I
0.776
Cla008944
Citrullus lanatus
Cla008944
I
0.776
Cucsa.321760
Cucumis sativus
Cucsa.321760
I
0.776
POPTR_0008s16390
Populus trichocarpa
POPTR_0008s16390
I
0.776
e_gw1.186.49.1
Physcomitrella patens
e_gw1.186.49.1
I
0.769
e_gw1.14.264.1
Physcomitrella patens
e_gw1.14.264.1
I
0.769
e_gw1.6.268.1
Physcomitrella patens
e_gw1.6.268.1
I
0.769
e_gw1.1.457.1
Physcomitrella patens
e_gw1.1.457.1
I
0.769
29603.m000536
Ricinus communis
29603.m000536
I
0.766
Cla021878
Citrullus lanatus
Cla021878
I
0.766
Pm009420
Prunus mume
Pm009420
I
0.766
Cucsa.255130
Cucumis sativus
Cucsa.255130
I
0.766
cassava40050.m1
Manihot esculenta
cassava40050.m1
I
0.766
cassava3359.m1
Manihot esculenta
cassava3359.m1
I
0.766
cassava22028.m1
Manihot esculenta
cassava22028.m1
I
0.766
cassava14614.m1
Manihot esculenta
cassava14614.m1
I
0.766
TRIUR3_03721
Triticum urartu
TRIUR3_03721
I
0.766
Al_scaffold_0409_3
Arabidopsis lyrata
Al_scaffold_0409_3
I
0.766
Si024070m.g
Setaria italica
Si024070m.g
I
0.766
scaffold_403098.1
Arabidopsis lyrata
scaffold_403098.1
I
0.766
PRUPE_ppa015007mg
Prunus persica
PRUPE_ppa015007mg
I
0.766
POPTR_0002s04260
Populus trichocarpa
POPTR_0002s04260
I
0.766
POPTR_0010s08530
Populus trichocarpa
POPTR_0010s08530
I
0.766
Solyc06g053720.1
Solanum lycopersicum
Solyc06g053720.1
I
0.766
Solyc09g089590.1
Solanum lycopersicum
Solyc09g089590.1
I
0.766
TRIUR3_04794
Triticum urartu
TRIUR3_04794
I
0.766
VIT_05s0049g00070
Vitis vinifera
VIT_05s0049g00070
I
0.766
Traes_1BL_4026DC5011
Triticum aestivum
Traes_1BL_4026DC5011
I
0.766
Traes_1AL_80D0BD0DC
Triticum aestivum
Traes_1AL_80D0BD0DC
I
0.766
TCM_021875
Theobroma cacao
TCM_021875
I
0.766
VIT_05s0049g00080
Vitis vinifera
VIT_05s0049g00080
I
0.766
Bostr.30275s0246
Boechera stricta
Bostr.30275s0246
I
0.766
Pavir.Ab00024
Panicum virgatum
Pavir.Ab00024
I
0.766
SapurV1A.0006s1030
Salix purpurea
SapurV1A.0006s1030
I
0.766
SapurV1A.0007s0790
Salix purpurea
SapurV1A.0007s0790
I
0.766
Pavir.Aa03593
Panicum virgatum
Pavir.Aa03593
I
0.766
orange1.1g041626m.g
Citrus sinensis
orange1.1g041626m.g
I
0.766
Gorai.012G106300
Gossypium raimondii
Gorai.012G106300
I
0.766
MDP0000225209
Malus domestica
MDP0000225209
I
0.766
SapurV1A.0292s0200
Salix purpurea
SapurV1A.0292s0200
I
0.766
SapurV1A.0378s0150
Salix purpurea
SapurV1A.0378s0150
I
0.766
PDK_20s1313421g001
Phoenix dactylifera
PDK_20s1313421g001
I
0.766
PDK_20s1360411g001
Phoenix dactylifera
PDK_20s1360411g001
I
0.766
LjSGA_038753.2
Lotus japonicus
LjSGA_038753.2
I
0.766
Thhalv10021992m.g
Eutrema salsugineum
Thhalv10021992m.g
I
0.766
Thhalv10015420m.g
Eutrema salsugineum
Thhalv10015420m.g
I
0.766
Thhalv10017870m.g
Eutrema salsugineum
Thhalv10017870m.g
I
0.766
Gorai.008G226800
Gossypium raimondii
Gorai.008G226800
I
0.766
Gorai.006G247700
Gossypium raimondii
Gorai.006G247700
I
0.766
Cagra.2636s0028
Capsella grandiflora
Cagra.2636s0028
I
0.766
Cagra.3356s0074
Capsella grandiflora
Cagra.3356s0074
I
0.766
Cagra.3462s0001
Capsella grandiflora
Cagra.3462s0001
I
0.766
Cagra.2117s0055
Capsella grandiflora
Cagra.2117s0055
I
0.766
PGSC0003DMG400040225
Solanum tuberosum
PGSC0003DMG400040225
I
0.766
Bostr.19424s0332
Boechera stricta
Bostr.19424s0332
I
0.766
Bostr.25993s0539
Boechera stricta
Bostr.25993s0539
I
0.766
Carubv10002935m.g
Capsella rubella
Carubv10002935m.g
I
0.766
Carubv10006881m.g
Capsella rubella
Carubv10006881m.g
I
0.766
gene08240-v1.0-hybrid
Fragaria vesca
gene08240-v1.0-hybrid
I
0.766
Gorai.005G047800
Gossypium raimondii
Gorai.005G047800
I
0.766
evm.TU.supercontig_44.99
Carica papaya
evm.TU.supercontig_44.99
I
0.766
Ciclev10006961m.g
Citrus clementina
Ciclev10006961m.g
I
0.766
Carubv10016073m.g
Capsella rubella
Carubv10016073m.g
I
0.766
Carubv10024766m.g
Capsella rubella
Carubv10024766m.g
I
0.766
Bostr.13129s0367
Boechera stricta
Bostr.13129s0367
I
0.766
Si019050m.g
Setaria italica
Si019050m.g
I
0.766
OBART05G10090
Oryza barthii
OBART05G10090
I
0.766
Bo9g176590
Brassica oleracea
Bo9g176590
I
0.766
OB05G18710
Oryza brachyantha
OB05G18710
I
0.766
OB02G10110
Oryza brachyantha
OB02G10110
I
0.766
OBART11G23770
Oryza barthii
OBART11G23770
I
0.766
OGLUM05G10360
Oryza glumaepatula
OGLUM05G10360
I
0.766
Bo1g102390
Brassica oleracea
Bo1g102390
I
0.766
OLONG_005038
Oryza longistaminata
OLONG_005038
I
0.766
Bo3g003640
Brassica oleracea
Bo3g003640
I
0.766
F775_00917
Aegilops tauschii
F775_00917
I
0.766
MTR_1g070265
Medicago truncatula
MTR_1g070265
I
0.766
MLOC_76482
Hordeum vulgare
MLOC_76482
I
0.766
GLYMA11G34285
Glycine max
GLYMA11G34285
I
0.766
Bra023759
Brassica rapa
Bra023759
I
0.766
RBE
Arabidopsis lyrata
fgenesh2_kg.6__542__AT5G06070.1
I
0.766
SUP
Arabidopsis lyrata
fgenesh2_kg.3__2524__AT3G23130.1
I
0.766
Bra013257
Brassica rapa
Bra013257
I
0.766
GSMUA_Achr7G26850_001
Musa acuminata
GSMUA_Achr7G26850_001
I
0.766
PGSC0003DMG400017271
Solanum tuberosum
PGSC0003DMG400017271
I
0.766
LPERR05G08090
Leersia perrieri
LPERR05G08090
I
0.766
Bra005874
Brassica rapa
Bra005874
I
0.766
Bra009160
Brassica rapa
Bra009160
I
0.766
Bo1g017920
Brassica oleracea
Bo1g017920
I
0.766
OGLUM11G22950
Oryza glumaepatula
OGLUM11G22950
I
0.766
AT4G17810
Arabidopsis thaliana
AT4G17810
I
0.766
ORGLA05G0088100
Oryza glaberrima
ORGLA05G0088100
I
0.766
RBE
Arabidopsis thaliana
AT5G06070
D
0.766
BGIOSGA018378
Oryza indica
BGIOSGA018378
I
0.766
ORUFI05G10920
Oryza rufipogon
ORUFI05G10920
I
0.766
SUP
Arabidopsis thaliana
AT3G23130
I
0.766
OS11G0707300
Oryza sativa
OS11G0707300
I
0.766
OS05G0286100
Oryza sativa
OS05G0286100
I
0.766
ZFP11
Arabidopsis thaliana
AT2G42410
I
0.766
ORUFI11G25670
Oryza rufipogon
ORUFI11G25670
I
0.766
OPUNC05G08760
Oryza punctata
OPUNC05G08760
I
0.766
OPUNC11G05640
Oryza punctata
OPUNC11G05640
I
0.766
OLONG_023754
Oryza longistaminata
OLONG_023754
I
0.766
BGIOSGA033510
Oryza indica
BGIOSGA033510
I
0.766
ONIVA11G23290
Oryza nivara
ONIVA11G23290
I
0.766
ONIVA06G26970
Oryza nivara
ONIVA06G26970
I
0.766
OMERI07G13080
Oryza meridionalis
OMERI07G13080
I
0.766
GLYMA13G34450
Glycine max
GLYMA13G34450
I
0.764
Cla016442
Citrullus lanatus
Cla016442
I
0.764
GLYMA12G35930
Glycine max
GLYMA12G35930
I
0.764
Lus10000705.g
Linum usitatissimum
Lus10000705.g
I
0.764
Lus10024875.g
Linum usitatissimum
Lus10024875.g
I
0.764
Ca_12901
Cicer arietinum
Ca_12901
I
0.764
Cucsa.313240
Cucumis sativus
Cucsa.313240
I
0.764
mg013419m
Mimulus guttatus
mg013419m
I
0.764
VIT_06s0004g05260
Vitis vinifera
VIT_06s0004g05260
N
0.760
AMTR_s00012p00258620
Amborella trichopoda
AMTR_s00012p00258620
N
0.760
AMTR_s00009p00194700
Amborella trichopoda
AMTR_s00009p00194700
N
0.760
gene30215-v1.0-hybrid
Fragaria vesca
gene30215-v1.0-hybrid
N
0.757
Bra033683
Brassica rapa
Bra033683
N
0.757
Bra027500
Brassica rapa
Bra027500
N
0.757
BGIOSGA025569
Oryza indica
BGIOSGA025569
N
0.757
chr1.CM0147.870.nc
Lotus japonicus
chr1.CM0147.870.nc
I
0.757
Bo7g065530
Brassica oleracea
Bo7g065530
N
0.757
Gorai.011G172000
Gossypium raimondii
Gorai.011G172000
N
0.757
MDP0000143134
Malus domestica
MDP0000143134
N
0.757
Bo9g059250
Brassica oleracea
Bo9g059250
N
0.757
orange1.1g037433m.g
Citrus sinensis
orange1.1g037433m.g
N
0.757
LPERR07G09750
Leersia perrieri
LPERR07G09750
N
0.757
ONIVA07G09640
Oryza nivara
ONIVA07G09640
N
0.757
TCM_020819
Theobroma cacao
TCM_020819
N
0.757
ONIVA07G09630
Oryza nivara
ONIVA07G09630
N
0.757
OLONG_012182
Oryza longistaminata
OLONG_012182
N
0.757
Pm002649
Prunus mume
Pm002649
N
0.757
Cla021877
Citrullus lanatus
Cla021877
N
0.757
OPUNC07G10480
Oryza punctata
OPUNC07G10480
N
0.757
ORGLA07G0099100
Oryza glaberrima
ORGLA07G0099100
N
0.757
PRUPE_ppa016491mg
Prunus persica
PRUPE_ppa016491mg
N
0.757
OS07G0417400
Oryza sativa
OS07G0417400
N
0.757
PRUPE_ppa021945mg
Prunus persica
PRUPE_ppa021945mg
N
0.757
ORUFI07G11810
Oryza rufipogon
ORUFI07G11810
N
0.757
scaffold_800693.1
Arabidopsis lyrata
scaffold_800693.1
N
0.757
Pm009419
Prunus mume
Pm009419
N
0.757
OGLUM07G11160
Oryza glumaepatula
OGLUM07G11160
N
0.757
GLYMA20G34840
Glycine max
GLYMA20G34840
N
0.757
GSMUA_Achr11G02150_001
Musa acuminata
GSMUA_Achr11G02150_001
N
0.757
GLYMA10G32810
Glycine max
GLYMA10G32810
N
0.757
Carubv10028256m.g
Capsella rubella
Carubv10028256m.g
N
0.757
Eucgr.H00184
Eucalyptus grandis
Eucgr.H00184
N
0.757
Ciclev10006751m.g
Citrus clementina
Ciclev10006751m.g
N
0.757
Cagra.19122s0001
Capsella grandiflora
Cagra.19122s0001
N
0.757
Bostr.3148s0115
Boechera stricta
Bostr.3148s0115
N
0.757
OB07G18110
Oryza brachyantha
OB07G18110
N
0.757
OBART07G11660
Oryza barthii
OBART07G11660
N
0.757
MTR_7g063220
Medicago truncatula
MTR_7g063220
I
0.757
MTR_1g075430
Medicago truncatula
MTR_1g075430
N
0.757
GSMUA_Achr8G14360_001
Musa acuminata
GSMUA_Achr8G14360_001
N
0.757
evm.TU.supercontig_44.98
Carica papaya
evm.TU.supercontig_44.98
N
0.757