GSMUA_Achr4G12160_001 (Musa acuminata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GSMUA_Achr4G12160_001 T118701_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZAT4
M01168_2.00
Arabidopsis thaliana
NNHRSTN

NASYDNN
PBM
Lambert et al.(2019)
pTH11142
0.762 0.800
ZAT9
M06817_2.00
Arabidopsis thaliana
YTACTWHH

DDWAGTAR
Dap-seq
OMalley et al.(2016)
At3g60580_col_a
0.762 0.778
ZAT1
M01167_2.00
Arabidopsis thaliana
NHRCTNN

NNAGYDN
PBM
Lambert et al.(2019)
pTH10246
0.761 0.778
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr4P12160_001 C2H2 ZF 84 106
GSMUA_Achr4P12160_001 C2H2 ZF 113 134

Links

Other C2H2 ZF family TFs
Other Musa acuminata TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000015931 Ailuropoda melanoleuca ENSAMEG00000015931 I 0.000
ENSBTAP00000011723-D1 Bos grunniens ENSBTAP00000011723-D1 N 0.000
FIGLA Canis familiaris ENSCAFG00000023073 N 0.000
ENSCHOG00000001351 Choloepus hoffmanni ENSCHOG00000001351 N 0.000
ENSCJAG00000019358 Callithrix jacchus ENSCJAG00000019358 I 0.000
ENSCSAG00000015178 Chlorocebus sabaeus ENSCSAG00000015178 I 0.000
FIGLA Microcebus murinus ENSMICG00000011826 N 0.000
FIGLA Macaca mulatta ENSMMUG00000020852 I 0.000
ENSMPUG00000007271 Mustela putorius furo ENSMPUG00000007271 I 0.000
ENSP00000333097 Macaca fascicularis ENSP00000333097 N 0.000
ENSPANG00000010751 Papio anubis ENSPANG00000010751 I 0.000
ENSPCAG00000006994 Procavia capensis ENSPCAG00000006994 N 0.000
FIGLA Pteropus vampyrus ENSPVAG00000013376 I 0.000
ENSSSCG00000023070 Sus scrofa ENSSSCG00000023070 N 0.000
ENSTSYG00000002605 Tarsius syrichta ENSTSYG00000002605 N 0.000
FIGLA Tursiops truncatus ENSTTRG00000011308 I 0.000
ENSVPAG00000002321 Vicugna pacos ENSVPAG00000002321 N 0.000