GSMUA_Achr6G24730_001 (Musa acuminata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GSMUA_Achr6G24730_001 T118724_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT5G03510
M00860_2.00
Arabidopsis thaliana
NNHRSWN

NWSYDNN
PBM
Franco-Zorrilla et al.(2014)
ZAT14
0.759 0.674
AT5G04390
M01857_2.00
Arabidopsis thaliana
NNHRSWN

NWSYDNN
PBM
Weirauch et al.(2014)
pTH7158
0.758 0.652
AT5G04390
M06819_2.00
Arabidopsis thaliana
HHHHWHCACTN

NAGTGDWDDDD
Dap-seq
OMalley et al.(2016)
At5g04390_col200_a
0.758 0.652
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr6P24730_001 C2H2 ZF 102 124
GSMUA_Achr6P24730_001 C2H2 ZF 162 184

Links

Other C2H2 ZF family TFs
Other Musa acuminata TFs

194 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_52353 Aegilops tauschii F775_52353 I 0.756
F775_18609 Aegilops tauschii F775_18609 I 0.769
F775_18608 Aegilops tauschii F775_18608 I 0.768
Aquca_010_00703 Aquilegia coerulea Aquca_010_00703 I 0.758
Aquca_027_00274 Aquilegia coerulea Aquca_027_00274 I 0.758
Aquca_010_00704 Aquilegia coerulea Aquca_010_00704 I 0.758
fgenesh2_kg.4__1796__AT2G37430.1 Arabidopsis lyrata fgenesh2_kg.4__1796__AT2G37430.1 I 0.760
AT5G04390 Arabidopsis thaliana AT5G04390 D 0.758
AT5G03510 Arabidopsis thaliana AT5G03510 D 0.759
Bostr.23794s0343 Boechera stricta Bostr.23794s0343 I 0.760
BRADI2G54500 Brachypodium distachyon BRADI2G54500 I 0.775
BRADI2G23160 Brachypodium distachyon BRADI2G23160 I 0.774
BRADI1G03790 Brachypodium distachyon BRADI1G03790 I 0.768
BRADI1G03780 Brachypodium distachyon BRADI1G03780 I 0.774
BRADI1G03770 Brachypodium distachyon BRADI1G03770 I 0.775
Bo4g030570 Brassica oleracea Bo4g030570 I 0.760
Bo4g186920 Brassica oleracea Bo4g186920 I 0.760
Bra005197 Brassica rapa Bra005197 I 0.760
Bra017188 Brassica rapa Bra017188 I 0.760
PK27255.1 Cannabis sativa PK27255.1 I 0.758
Cagra.0666s0001 Capsella grandiflora Cagra.0666s0001 I 0.760
Carubv10024141m.g Capsella rubella Carubv10024141m.g I 0.760
evm.TU.contig_30912.1 Carica papaya evm.TU.contig_30912.1 I 0.758
evm.TU.supercontig_163.32 Carica papaya evm.TU.supercontig_163.32 I 0.758
evm.TU.supercontig_190.30 Carica papaya evm.TU.supercontig_190.30 I 0.758
Cla004091 Citrullus lanatus Cla004091 I 0.758
Cla018516 Citrullus lanatus Cla018516 I 0.758
Cla008415 Citrullus lanatus Cla008415 I 0.758
Cla013490 Citrullus lanatus Cla013490 I 0.758
Ciclev10013311m.g Citrus clementina Ciclev10013311m.g I 0.758
Ciclev10029464m.g Citrus clementina Ciclev10029464m.g I 0.759
Ciclev10032889m.g Citrus clementina Ciclev10032889m.g I 0.764
Ciclev10032922m.g Citrus clementina Ciclev10032922m.g I 0.764
Ciclev10032899m.g Citrus clementina Ciclev10032899m.g I 0.764
orange1.1g031966m.g Citrus sinensis orange1.1g031966m.g I 0.758
orange1.1g040287m.g Citrus sinensis orange1.1g040287m.g I 0.764
orange1.1g044181m.g Citrus sinensis orange1.1g044181m.g I 0.764
orange1.1g041414m.g Citrus sinensis orange1.1g041414m.g I 0.764
orange1.1g031430m.g Citrus sinensis orange1.1g031430m.g I 0.759
Cucsa.379890 Cucumis sativus Cucsa.379890 I 0.758
Cucsa.213470 Cucumis sativus Cucsa.213470 I 0.758
Cucsa.165460 Cucumis sativus Cucsa.165460 I 0.758
Cucsa.065930 Cucumis sativus Cucsa.065930 I 0.758
Eucgr.B02398 Eucalyptus grandis Eucgr.B02398 I 0.768
Eucgr.A01233 Eucalyptus grandis Eucgr.A01233 I 0.758
Eucgr.B02390 Eucalyptus grandis Eucgr.B02390 I 0.758
Eucgr.B02394 Eucalyptus grandis Eucgr.B02394 I 0.760
Eucgr.B02395 Eucalyptus grandis Eucgr.B02395 I 0.758
Eucgr.A01231 Eucalyptus grandis Eucgr.A01231 I 0.758
Eucgr.B02399 Eucalyptus grandis Eucgr.B02399 I 0.758
Eucgr.L02150 Eucalyptus grandis Eucgr.L02150 I 0.758
Eucgr.A01232 Eucalyptus grandis Eucgr.A01232 I 0.758
Eucgr.G02910 Eucalyptus grandis Eucgr.G02910 I 0.758
Eucgr.B02396 Eucalyptus grandis Eucgr.B02396 I 0.758
Thhalv10017303m.g Eutrema salsugineum Thhalv10017303m.g I 0.760
gene18205-v1.0-hybrid Fragaria vesca gene18205-v1.0-hybrid I 0.758
gene18204-v1.0-hybrid Fragaria vesca gene18204-v1.0-hybrid I 0.758
gene13959-v1.0-hybrid Fragaria vesca gene13959-v1.0-hybrid I 0.758
gene13960-v1.0-hybrid Fragaria vesca gene13960-v1.0-hybrid I 0.758
gene13962-v1.0-hybrid Fragaria vesca gene13962-v1.0-hybrid I 0.758
gene26659-v1.0-hybrid Fragaria vesca gene26659-v1.0-hybrid I 0.758
gene28452-v1.0-hybrid Fragaria vesca gene28452-v1.0-hybrid I 0.758
GLYMA02G10490 Glycine max GLYMA02G10490 I 0.758
GLYMA10G43630 Glycine max GLYMA10G43630 I 0.758
GLYMA18G52410 Glycine max GLYMA18G52410 I 0.758
GLYMA19G35740 Glycine max GLYMA19G35740 I 0.758
GLYMA20G23180 Glycine max GLYMA20G23180 I 0.758
GLYMA03G33050 Glycine max GLYMA03G33050 I 0.758
Gorai.003G136200 Gossypium raimondii Gorai.003G136200 I 0.759
Gorai.006G176000 Gossypium raimondii Gorai.006G176000 I 0.758
Gorai.006G176100 Gossypium raimondii Gorai.006G176100 I 0.760
Gorai.010G202400 Gossypium raimondii Gorai.010G202400 I 0.758
Gorai.006G104800 Gossypium raimondii Gorai.006G104800 I 0.758
Gorai.011G254200 Gossypium raimondii Gorai.011G254200 I 0.758
Gorai.012G006900 Gossypium raimondii Gorai.012G006900 I 0.758
Gorai.013G023300 Gossypium raimondii Gorai.013G023300 I 0.758
Gorai.011G254300 Gossypium raimondii Gorai.011G254300 I 0.758
MLOC_19822 Hordeum vulgare MLOC_19822 I 0.766
MLOC_63032 Hordeum vulgare MLOC_63032 I 0.768
LPERR01G31460 Leersia perrieri LPERR01G31460 I 0.762
LPERR01G31500 Leersia perrieri LPERR01G31500 I 0.775
LPERR03G33240 Leersia perrieri LPERR03G33240 I 0.768
LPERR03G33230 Leersia perrieri LPERR03G33230 I 0.766
Lus10024428.g Linum usitatissimum Lus10024428.g I 0.758
Lus10030330.g Linum usitatissimum Lus10030330.g I 0.758
chr5.CM0180.20.nc Lotus japonicus chr5.CM0180.20.nc I 0.758
MDP0000606526 Malus domestica MDP0000606526 I 0.758
MDP0000137826 Malus domestica MDP0000137826 I 0.758
MDP0000170739 Malus domestica MDP0000170739 I 0.758
MDP0000224773 Malus domestica MDP0000224773 I 0.758
MDP0000257423 Malus domestica MDP0000257423 I 0.758
MDP0000595671 Malus domestica MDP0000595671 I 0.758
cassava9455.m1 Manihot esculenta cassava9455.m1 I 0.758
cassava42054.valid.m1 Manihot esculenta cassava42054.valid.m1 I 0.758
cassava35212.m1 Manihot esculenta cassava35212.m1 I 0.759
cassava15802.m1 Manihot esculenta cassava15802.m1 I 0.758
cassava16287.m1 Manihot esculenta cassava16287.m1 I 0.758
cassava39064.m1 Manihot esculenta cassava39064.m1 I 0.764
MTR_7g023560 Medicago truncatula MTR_7g023560 I 0.758
mgf021789m Mimulus guttatus mgf021789m I 0.757
mgf023249m Mimulus guttatus mgf023249m I 0.758
GSMUA_Achr5G28550_001 Musa acuminata GSMUA_Achr5G28550_001 I 0.764
GSMUA_AchrUn_randomG07580_001 Musa acuminata GSMUA_AchrUn_randomG07580_001 I 0.759
GSMUA_Achr6G15360_001 Musa acuminata GSMUA_Achr6G15360_001 I 0.758
GSMUA_Achr10G03700_001 Musa acuminata GSMUA_Achr10G03700_001 I 0.758
GSMUA_Achr10G06730_001 Musa acuminata GSMUA_Achr10G06730_001 I 0.769
GSMUA_Achr10G13540_001 Musa acuminata GSMUA_Achr10G13540_001 I 0.758
GSMUA_Achr11G02250_001 Musa acuminata GSMUA_Achr11G02250_001 I 0.769
GSMUA_Achr11G21920_001 Musa acuminata GSMUA_Achr11G21920_001 I 0.769
GSMUA_Achr5G29140_001 Musa acuminata GSMUA_Achr5G29140_001 I 0.758
GSMUA_Achr11G24480_001 Musa acuminata GSMUA_Achr11G24480_001 I 0.764
GSMUA_Achr1G06720_001 Musa acuminata GSMUA_Achr1G06720_001 I 0.769
GSMUA_Achr1G03310_001 Musa acuminata GSMUA_Achr1G03310_001 I 0.758
GSMUA_Achr1G01260_001 Musa acuminata GSMUA_Achr1G01260_001 I 0.759
OBART03G39050 Oryza barthii OBART03G39050 I 0.768
OB03G46010 Oryza brachyantha OB03G46010 I 0.768
ORGLA01G0304700 Oryza glaberrima ORGLA01G0304700 I 0.775
ORGLA01G0304300 Oryza glaberrima ORGLA01G0304300 I 0.762
ORGLA03G0358100 Oryza glaberrima ORGLA03G0358100 I 0.766
ORGLA03G0358200 Oryza glaberrima ORGLA03G0358200 I 0.768
OGLUM01G40470 Oryza glumaepatula OGLUM01G40470 I 0.762
OGLUM01G40530 Oryza glumaepatula OGLUM01G40530 I 0.775
OGLUM03G38900 Oryza glumaepatula OGLUM03G38900 I 0.766
OGLUM03G38910 Oryza glumaepatula OGLUM03G38910 I 0.768
BGIOSGA013832 Oryza indica BGIOSGA013832 I 0.768
BGIOSGA013831 Oryza indica BGIOSGA013831 I 0.766
BGIOSGA004768 Oryza indica BGIOSGA004768 I 0.775
BGIOSGA000523 Oryza indica BGIOSGA000523 I 0.762
OMERI01G33680 Oryza meridionalis OMERI01G33680 I 0.762
OMERI03G35880 Oryza meridionalis OMERI03G35880 I 0.768
OMERI03G35870 Oryza meridionalis OMERI03G35870 I 0.766
OMERI01G33710 Oryza meridionalis OMERI01G33710 I 0.775
ONIVA01G41600 Oryza nivara ONIVA01G41600 I 0.762
ONIVA01G41740 Oryza nivara ONIVA01G41740 I 0.775
ONIVA03G40710 Oryza nivara ONIVA03G40710 I 0.766
ONIVA03G40720 Oryza nivara ONIVA03G40720 I 0.768
OPUNC01G35440 Oryza punctata OPUNC01G35440 I 0.775
OPUNC01G35470 Oryza punctata OPUNC01G35470 I 0.775
ORUFI01G40000 Oryza rufipogon ORUFI01G40000 I 0.762
ORUFI03G40740 Oryza rufipogon ORUFI03G40740 I 0.766
OS03G0820400 Oryza sativa OS03G0820400 I 0.768
OS01G0838600 Oryza sativa OS01G0838600 I 0.762
OS03G0820300 Oryza sativa OS03G0820300 I 0.766
OS01G0839100 Oryza sativa OS01G0839100 I 0.775
Pavir.Eb03660 Panicum virgatum Pavir.Eb03660 I 0.775
Pavir.J00894 Panicum virgatum Pavir.J00894 I 0.768
Pavir.J14338 Panicum virgatum Pavir.J14338 I 0.775
Pavir.J04850 Panicum virgatum Pavir.J04850 I 0.769
POPTR_0010s21650 Populus trichocarpa POPTR_0010s21650 I 0.758
POPTR_0008s05110 Populus trichocarpa POPTR_0008s05110 I 0.758
POPTR_0006s12340 Populus trichocarpa POPTR_0006s12340 I 0.758
Pm000815 Prunus mume Pm000815 I 0.758
Pm018761 Prunus mume Pm018761 I 0.758
Pm002762 Prunus mume Pm002762 I 0.758
PRUPE_ppa011762mg Prunus persica PRUPE_ppa011762mg I 0.758
PRUPE_ppa012242mg Prunus persica PRUPE_ppa012242mg I 0.764
PRUPE_ppa022066mg Prunus persica PRUPE_ppa022066mg I 0.758
29585.m000611 Ricinus communis 29585.m000611 I 0.758
29154.m000218 Ricinus communis 29154.m000218 I 0.758
28637.m000203 Ricinus communis 28637.m000203 I 0.759
SapurV1A.0038s0750 Salix purpurea SapurV1A.0038s0750 I 0.758
SapurV1A.0095s0590 Salix purpurea SapurV1A.0095s0590 I 0.758
Si008395m.g Setaria italica Si008395m.g I 0.769
Si003051m.g Setaria italica Si003051m.g I 0.774
Si037672m.g Setaria italica Si037672m.g I 0.768
Solyc05g054650.1 Solanum lycopersicum Solyc05g054650.1 I 0.758
Solyc05g054660.1 Solanum lycopersicum Solyc05g054660.1 I 0.758
Solyc06g075780.1 Solanum lycopersicum Solyc06g075780.1 I 0.768
PGSC0003DMG400023518 Solanum tuberosum PGSC0003DMG400023518 I 0.758
PGSC0003DMG400023547 Solanum tuberosum PGSC0003DMG400023547 I 0.758
PGSC0003DMG400039582 Solanum tuberosum PGSC0003DMG400039582 I 0.760
PGSC0003DMG401030312 Solanum tuberosum PGSC0003DMG401030312 I 0.768
PGSC0003DMG400008327 Solanum tuberosum PGSC0003DMG400008327 I 0.760
Sb10g031270 Sorghum bicolor Sb10g031270 I 0.769
Sb01g003280 Sorghum bicolor Sb01g003280 I 0.768
Sb03g039270 Sorghum bicolor Sb03g039270 I 0.775
TCM_041899 Theobroma cacao TCM_041899 I 0.759
TRAES3BF117500110CFD_g Triticum aestivum TRAES3BF117500110CFD_g I 0.762
Traes_5BL_3A9D3CEEF Triticum aestivum Traes_5BL_3A9D3CEEF I 0.766
Traes_5DL_9D713AD9C Triticum aestivum Traes_5DL_9D713AD9C I 0.772
TRAES3BF127400030CFD_g Triticum aestivum TRAES3BF127400030CFD_g I 0.775
Traes_5BL_9C687EE11 Triticum aestivum Traes_5BL_9C687EE11 I 0.766
Traes_5BL_BB99746DD Triticum aestivum Traes_5BL_BB99746DD I 0.766
Traes_5DL_50E35B4F3 Triticum aestivum Traes_5DL_50E35B4F3 I 0.768
TRIUR3_01065 Triticum urartu TRIUR3_01065 I 0.769
TRIUR3_01063 Triticum urartu TRIUR3_01063 I 0.769
VIT_13s0019g00480 Vitis vinifera VIT_13s0019g00480 I 0.758
VIT_06s0004g04180 Vitis vinifera VIT_06s0004g04180 I 0.758
GRMZM2G112799 Zea mays GRMZM2G112799 I 0.775
GRMZM5G804618 Zea mays GRMZM5G804618 I 0.762
GRMZM2G307402 Zea mays GRMZM2G307402 I 0.768
GRMZM2G002805 Zea mays GRMZM2G002805 I 0.774
GRMZM2G061626 Zea mays GRMZM2G061626 I 0.774
GRMZM2G376061 Zea mays GRMZM2G376061 I 0.775