CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HelroG156740
(
Helobdella robusta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
HelroG156740
T119214_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
luna
M03704_2.00
Drosophila melanogaster
RCCACRCCCH
DGGGYGTGGY
SELEX
Nitta et al.(2015)
luna_1
0.760
0.739
luna
M06163_2.00
Drosophila melanogaster
RRMHMCRCCC
GGGYGKDKYY
B1H
Zhu et al.(2011)
luna_SANGER_5_FBgn0040765
0.760
0.739
luna
M06164_2.00
Drosophila melanogaster
DRCCMCGCCCHNNN
NNNDGGGCGKGGYH
B1H
Zhu et al.(2011)
luna_SOLEXA_5_FBgn0040765
0.760
0.739
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HelroP156740
C2H2 ZF
2
26
YKCEHDECNKMYNKVSHLKAHVRTH
HelroP156740
C2H2 ZF
32
56
YICAWEGCSWRFARSDELTRHMRKH
HelroP156740
C2H2 ZF
62
84
FKCPVCTRSFSRSDHLRLHLKRH
Links
Other
C2H2 ZF
family TFs
Other
Helobdella robusta
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCSAVG00000009966
Ciona savignyi
ENSCSAVG00000009966
I
0.764
BGLB001194
Biomphalaria glabrata
BGLB001194
I
0.764
klf2
Ciona intestinalis
ENSCING00000014590
I
0.764
NV16008
Nasonia vitripennis
NV16008
I
0.760
SMAR002408
Strigamia maritima
SMAR002408
I
0.760
NEMVEDRAFT_v1g229565
Nematostella vectensis
NEMVEDRAFT_v1g229565
I
0.760
ML00922a
Mnemiopsis leidyi
ML00922a
I
0.760
tetur01g01330
Tetranychus urticae
tetur01g01330
I
0.760
ML25776a
Mnemiopsis leidyi
ML25776a
I
0.760
klf6.L
Xenopus laevis
XB-GENE-6254475
I
0.760
klf6.S
Xenopus laevis
XB-GENE-986307
I
0.760
MDOA011094
Musca domestica
MDOA011094
I
0.760
klf6
Xenopus tropicalis
XB-GENE-986303
I
0.760
AAEL010126
Aedes aegypti
AAEL010126
I
0.760
LCUP011103
Lucilia cuprina
LCUP011103
I
0.760
estExt_fgenesh2_pg.C_1540054
Branchiostoma floridae
estExt_fgenesh2_pg.C_1540054
I
0.760
GB52133
Apis mellifera
GB52133
I
0.760
GF12443
Drosophila ananassae
FBgn0089480
I
0.760
GG22702
Drosophila erecta
FBgn0114867
I
0.760
luna
Drosophila melanogaster
FBgn0040765
D
0.760
DAPPUDRAFT_310992
Daphnia pulex
DAPPUDRAFT_310992
I
0.760
ACYPI23999
Acyrthosiphon pisum
ACYPI23999
I
0.760
AGAP007038
Anopheles gambiae
AGAP007038
I
0.760
GH20565
Drosophila grimshawi
FBgn0128028
I
0.760
GI19759
Drosophila mojavensis
FBgn0142496
I
0.760
GK20661
Drosophila willistoni
FBgn0222657
I
0.760
GJ18175
Drosophila virilis
FBgn0205340
I
0.760
GM20477
Drosophila sechellia
FBgn0175359
I
0.760
GE13058
Drosophila yakuba
FBgn0230762
I
0.760
GL20646
Drosophila persimilis
FBgn0158241
I
0.760
NEMVEDRAFT_v1g83807
Nematostella vectensis
NEMVEDRAFT_v1g83807
I
0.759
NEMVEDRAFT_v1g147359
Nematostella vectensis
NEMVEDRAFT_v1g147359
I
0.759
tetur01g11740
Tetranychus urticae
tetur01g11740
I
0.756