HelroG156740 (Helobdella robusta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 HelroG156740 T119214_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
luna
M03704_2.00
Drosophila melanogaster
RCCACRCCCH

DGGGYGTGGY
SELEX
Nitta et al.(2015)
luna_1
0.760 0.739
luna
M06163_2.00
Drosophila melanogaster
RRMHMCRCCC

GGGYGKDKYY
B1H
Zhu et al.(2011)
luna_SANGER_5_FBgn0040765
0.760 0.739
luna
M06164_2.00
Drosophila melanogaster
DRCCMCGCCCHNNN

NNNDGGGCGKGGYH
B1H
Zhu et al.(2011)
luna_SOLEXA_5_FBgn0040765
0.760 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HelroP156740 C2H2 ZF 2 26
HelroP156740 C2H2 ZF 32 56
HelroP156740 C2H2 ZF 62 84

Links

Other C2H2 ZF family TFs
Other Helobdella robusta TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28859.m000324 Ricinus communis 28859.m000324 N 0.000
29758.m000681 Ricinus communis 29758.m000681 N 0.000
Bo2g152930 Brassica oleracea Bo2g152930 N 0.000
Bostr.29827s0002 Boechera stricta Bostr.29827s0002 N 0.000
Bra020611 Brassica rapa Bra020611 N 0.000
Cagra.13833s0001 Capsella grandiflora Cagra.13833s0001 N 0.000
Carubv10000250m.g Capsella rubella Carubv10000250m.g N 0.000
cassava40276.m1 Manihot esculenta cassava40276.m1 N 0.000
cassava40936.m1 Manihot esculenta cassava40936.m1 N 0.000
Ca_07896 Cicer arietinum Ca_07896 N 0.000
Ciclev10014474m.g Citrus clementina Ciclev10014474m.g N 0.000
Ciclev10014481m.g Citrus clementina Ciclev10014481m.g N 0.000
Cucsa.044640 Cucumis sativus Cucsa.044640 N 0.000
Cucsa.100320 Cucumis sativus Cucsa.100320 N 0.000
Eucgr.D01451 Eucalyptus grandis Eucgr.D01451 N 0.000
Eucgr.H00883 Eucalyptus grandis Eucgr.H00883 N 0.000
FRS10 Arabidopsis thaliana AT5G28530 N 0.000
FRS10 Populus trichocarpa POPTR_0014s16500 N 0.000
FRS10 Vitis vinifera VIT_12s0057g00960 N 0.000
gene19817-v1.0-hybrid Fragaria vesca gene19817-v1.0-hybrid N 0.000
GLYMA09G01540 Glycine max GLYMA09G01540 N 0.000
Gorai.005G129200 Gossypium raimondii Gorai.005G129200 N 0.000
Gorai.010G189600 Gossypium raimondii Gorai.010G189600 N 0.000
MDP0000249284 Malus domestica MDP0000249284 N 0.000
mgf004308m Mimulus guttatus mgf004308m N 0.000
orange1.1g005549m.g Citrus sinensis orange1.1g005549m.g N 0.000
orange1.1g005579m.g Citrus sinensis orange1.1g005579m.g N 0.000
PK07950.1 Cannabis sativa PK07950.1 N 0.000
PK09224.1 Cannabis sativa PK09224.1 N 0.000
Pm015052 Prunus mume Pm015052 N 0.000
POPTR_0016s00900 Populus trichocarpa POPTR_0016s00900 N 0.000
PRUPE_ppa002276mg Prunus persica PRUPE_ppa002276mg N 0.000
PRUPE_ppa002284mg Prunus persica PRUPE_ppa002284mg N 0.000
SapurV1A.0054s0360 Salix purpurea SapurV1A.0054s0360 N 0.000
SapurV1A.0089s0660 Salix purpurea SapurV1A.0089s0660 N 0.000
Solyc07g045520.2 Solanum lycopersicum Solyc07g045520.2 N 0.000
TCM_020251 Theobroma cacao TCM_020251 N 0.000
TCM_030416 Theobroma cacao TCM_030416 N 0.000
Thhalv10003748m.g Eutrema salsugineum Thhalv10003748m.g N 0.000
VIT_00s0194g00200 Vitis vinifera VIT_00s0194g00200 N 0.000