CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HelroG63207
(
Helobdella robusta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
HelroG63207
T119287_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
erm
M03686_2.00
Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA
SELEX
Nitta et al.(2015)
CG31670_1
0.773
0.848
erm
M06128_2.00
Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM
B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375
0.773
0.848
erm
M06129_2.00
Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV
B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375
0.773
0.848
FEZF1
M08307_2.00
Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN
ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE
0.767
0.848
FEZF1
M08889_2.00
Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH
Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C
0.767
0.848
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HelroP63207
C2H2 ZF
28
50
FKCPECGKTFNAHYNLNRHMPVH
HelroP63207
C2H2 ZF
56
78
FICKVCDKGFRQASTLCRHKIIH
HelroP63207
C2H2 ZF
84
106
HKCKTCGKAFNRSSTLNTHMLIH
HelroP63207
C2H2 ZF
112
134
FICDYCGKGFHQKGNYKNHRLTH
HelroP63207
C2H2 ZF
140
162
FKCEICHKAFHQIYNLTFHMHTH
HelroP63207
C2H2 ZF
168
191
FTCKICGKGFCRNFDLKKHSRKLH
Links
Other
C2H2 ZF
family TFs
Other
Helobdella robusta
TFs
157 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy