HelroG86767 (Helobdella robusta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 HelroG86767 T119334_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
gl
M03671_2.00
Drosophila melanogaster
RTTACCATACAAGTGCAV

BTGCACTTGTATGGTAAY
SELEX
Nitta et al.(2015)
gl_1
0.790 0.886
gl
M06078_2.00
Drosophila melanogaster
DAYNCWTBAAAT

ATTTVAWGNRTH
B1H
Zhu et al.(2011)
gl_FlyReg_FBgn0004618
0.790 0.886
gl
M06079_2.00
Drosophila melanogaster
TTRTABGGYTTC

GAARCCVTAYAA
B1H
Zhu et al.(2011)
gl_SANGER_5_FBgn0004618
0.790 0.886
gl
M06080_2.00
Drosophila melanogaster
NNBDWNTADGGCTTC

GAAGCCHTANWHVNN
B1H
Zhu et al.(2011)
gl_SOLEXA_5_FBgn0004618
0.790 0.886
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HelroP86767 C2H2 ZF 59 80
HelroP86767 C2H2 ZF 86 108
HelroP86767 C2H2 ZF 114 136
HelroP86767 C2H2 ZF 142 164
HelroP86767 C2H2 ZF 170 192

Links

Other C2H2 ZF family TFs
Other Helobdella robusta TFs

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46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action