CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HelroG86767
(
Helobdella robusta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
HelroG86767
T119334_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
gl
M03671_2.00
Drosophila melanogaster
RTTACCATACAAGTGCAV
BTGCACTTGTATGGTAAY
SELEX
Nitta et al.(2015)
gl_1
0.790
0.886
gl
M06078_2.00
Drosophila melanogaster
DAYNCWTBAAAT
ATTTVAWGNRTH
B1H
Zhu et al.(2011)
gl_FlyReg_FBgn0004618
0.790
0.886
gl
M06079_2.00
Drosophila melanogaster
TTRTABGGYTTC
GAARCCVTAYAA
B1H
Zhu et al.(2011)
gl_SANGER_5_FBgn0004618
0.790
0.886
gl
M06080_2.00
Drosophila melanogaster
NNBDWNTADGGCTTC
GAAGCCHTANWHVNN
B1H
Zhu et al.(2011)
gl_SOLEXA_5_FBgn0004618
0.790
0.886
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HelroP86767
C2H2 ZF
59
80
LCRICGKSYARPSTLKTHLRTH
HelroP86767
C2H2 ZF
86
108
YVCHTCSKSFSQAANLTAHVRTH
HelroP86767
C2H2 ZF
114
136
FRCSVCDRRFSQSSSVTTHMRTH
HelroP86767
C2H2 ZF
142
164
YRCRTCKKTFSDSSTLTKHLRIH
HelroP86767
C2H2 ZF
170
192
YRCKICLLRFSQSGNLNRHMRVH
Links
Other
C2H2 ZF
family TFs
Other
Helobdella robusta
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy