HETIRDRAFT_248302 (Heterobasidion irregulare)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 HETIRDRAFT_248302 T119384_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
cre-1
M01198_2.00
Neurospora crassa
CCCCRNNN

NNNYGGGG
PBM
Lambert et al.(2019)
pTH8711
0.791 0.804
RO3G_16591
M01442_2.00
Rhizopus oryzae
NCCCCRCDNN

NNHGYGGGGN
PBM
Najafabadi et al.(2015a)
pTH10231
0.790 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ETW81414 C2H2 ZF 3 27
ETW81414 C2H2 ZF 33 57

Links

Other C2H2 ZF family TFs
Other Heterobasidion irregulare TFs

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272 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action