ISCW000054 (Ixodes scapularis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ISCW000054 T119873_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
hkb
M03710_2.00
Drosophila melanogaster
VTCACGCCYHHN

NDDRGGCGTGAB
SELEX
Nitta et al.(2015)
hkb_1
0.757 0.783
hkb
M06470_2.00
Drosophila melanogaster
TCACGCCYM

KRGGCGTGA
B1H
Mathelier et al.(2014)
MA0450.1
0.757 0.783
hkb
M06168_2.00
Drosophila melanogaster
TCACGCCYM

KRGGCGTGA
B1H
Zhu et al.(2011)
hkb_NAR_FBgn0001204
0.757 0.783
hkb
M09666_2.00
Drosophila melanogaster
YMACGCCCMY

RKGGGCGTKR
Misc
Kulakovskiy et al.(2009)
hkb
0.757 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ISCW000054-PA C2H2 ZF 74 96
ISCW000054-PA C2H2 ZF 102 126
ISCW000054-PA C2H2 ZF 132 154

Links

Other C2H2 ZF family TFs
Other Ixodes scapularis TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
RPRC014216 Rhodnius prolixus RPRC014216 N 0.785
CLEC005464 Cimex lectularius CLEC005464 I 0.784
HHAL006666-PA Halyomorpha halys HHAL006666-PA N 0.781
tetur02g06400 Tetranychus urticae tetur02g06400 I 0.780
SMAR000785 Strigamia maritima SMAR000785 I 0.780
PHUM127400 Pediculus humanus PHUM127400 I 0.780
tetur02g06440 Tetranychus urticae tetur02g06440 I 0.777
TC010992 Tribolium castaneum TC010992 I 0.774
LDEC017422 Leptinotarsa decemlineata LDEC017422 I 0.774
GA22020 Drosophila pseudoobscura FBgn0082005 I 0.761
GJ14181 Drosophila virilis FBgn0201398 I 0.761
MDOA010102 Musca domestica MDOA010102 I 0.761
GF16814 Drosophila ananassae FBgn0093835 I 0.761
GH18734 Drosophila grimshawi FBgn0126201 I 0.761
GI22886 Drosophila mojavensis FBgn0145613 I 0.761
LCUP000702 Lucilia cuprina LCUP000702 I 0.761
GL12325 Drosophila persimilis FBgn0149932 I 0.761
GK13762 Drosophila willistoni FBgn0215770 I 0.761
HMEL016959 Heliconius melpomene HMEL016959 I 0.757
GM10707 Drosophila sechellia FBgn0165653 I 0.757
GG11643 Drosophila erecta FBgn0103940 I 0.757
GD19684 Drosophila simulans FBgn0191175 I 0.757
GE25358 Drosophila yakuba FBgn0242436 I 0.757
KGM_06603 Danaus plexippus KGM_06603 I 0.757
hkb Drosophila melanogaster FBgn0261434 D 0.757
MCINX014717 Melitaea cinxia MCINX014717 I 0.757