CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ISCW000054
(
Ixodes scapularis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ISCW000054
T119873_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
hkb
M03710_2.00
Drosophila melanogaster
VTCACGCCYHHN
NDDRGGCGTGAB
SELEX
Nitta et al.(2015)
hkb_1
0.757
0.783
hkb
M06470_2.00
Drosophila melanogaster
TCACGCCYM
KRGGCGTGA
B1H
Mathelier et al.(2014)
MA0450.1
0.757
0.783
hkb
M06168_2.00
Drosophila melanogaster
TCACGCCYM
KRGGCGTGA
B1H
Zhu et al.(2011)
hkb_NAR_FBgn0001204
0.757
0.783
hkb
M09666_2.00
Drosophila melanogaster
YMACGCCCMY
RKGGGCGTKR
Misc
Kulakovskiy et al.(2009)
hkb
0.757
0.783
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ISCW000054-PA
C2H2 ZF
74
96
FQCPHCKVSFSNNGQLKGHVRIH
ISCW000054-PA
C2H2 ZF
102
126
FACEHDGCGKTFTRNEELTRHKRIH
ISCW000054-PA
C2H2 ZF
132
154
FPCPLCQKPFGRKDHLKKHIKTH
Links
Other
C2H2 ZF
family TFs
Other
Ixodes scapularis
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RPRC014216
Rhodnius prolixus
RPRC014216
N
0.785
CLEC005464
Cimex lectularius
CLEC005464
I
0.784
HHAL006666-PA
Halyomorpha halys
HHAL006666-PA
N
0.781
tetur02g06400
Tetranychus urticae
tetur02g06400
I
0.780
SMAR000785
Strigamia maritima
SMAR000785
I
0.780
PHUM127400
Pediculus humanus
PHUM127400
I
0.780
tetur02g06440
Tetranychus urticae
tetur02g06440
I
0.777
TC010992
Tribolium castaneum
TC010992
I
0.774
LDEC017422
Leptinotarsa decemlineata
LDEC017422
I
0.774
GA22020
Drosophila pseudoobscura
FBgn0082005
I
0.761
GJ14181
Drosophila virilis
FBgn0201398
I
0.761
MDOA010102
Musca domestica
MDOA010102
I
0.761
GF16814
Drosophila ananassae
FBgn0093835
I
0.761
GH18734
Drosophila grimshawi
FBgn0126201
I
0.761
GI22886
Drosophila mojavensis
FBgn0145613
I
0.761
LCUP000702
Lucilia cuprina
LCUP000702
I
0.761
GL12325
Drosophila persimilis
FBgn0149932
I
0.761
GK13762
Drosophila willistoni
FBgn0215770
I
0.761
HMEL016959
Heliconius melpomene
HMEL016959
I
0.757
GM10707
Drosophila sechellia
FBgn0165653
I
0.757
GG11643
Drosophila erecta
FBgn0103940
I
0.757
GD19684
Drosophila simulans
FBgn0191175
I
0.757
GE25358
Drosophila yakuba
FBgn0242436
I
0.757
KGM_06603
Danaus plexippus
KGM_06603
I
0.757
hkb
Drosophila melanogaster
FBgn0261434
D
0.757
MCINX014717
Melitaea cinxia
MCINX014717
I
0.757