CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ISCW005884
(
Ixodes scapularis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ISCW005884
T119936_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OSR2
M04521_2.00
Homo sapiens
NGCTACYGBD
HVCRGTAGCN
SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX
0.807
0.913
OSR2
M08324_2.00
Homo sapiens
NBDGCTNCTGN
NCAGNAGCHVN
ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME
0.807
0.913
OSR2
M08908_2.00
Homo sapiens
NBHNYWGCTNCTSHDB
VHDSAGNAGCWRNDVN
Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C
0.807
0.913
OSR2
M04522_2.00
Homo sapiens
NGCTACTGND
HNCAGTAGCN
SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX
0.807
0.913
bowl
M03676_2.00
Drosophila melanogaster
GCGTAABACNRGKAGYN
NRCTMCYNGTVTTACGC
SELEX
Nitta et al.(2015)
bowl_1
0.799
0.904
bowl
M03677_2.00
Drosophila melanogaster
NGCTACYGTRTTACGCN
NGCGTAAYACRGTAGCN
SELEX
Nitta et al.(2015)
bowl_2
0.799
0.904
bowl
M06090_2.00
Drosophila melanogaster
RCTWCYGK
MCRGWAGY
B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893
0.799
0.904
sob
M03674_2.00
Drosophila melanogaster
RCTACYGNRTTACGCV
BGCGTAAYNCRGTAGY
SELEX
Nitta et al.(2015)
sob_1
0.799
0.896
sob
M03675_2.00
Drosophila melanogaster
NGCGTAABNSNRGTAGY
RCTACYNSNVTTACGCN
SELEX
Nitta et al.(2015)
sob_2
0.799
0.896
sob
M06088_2.00
Drosophila melanogaster
GCTWCTGBDNBDV
BHVNHVCAGWAGC
B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892
0.799
0.896
sob
M06089_2.00
Drosophila melanogaster
BDGCTACYGKDBNN
NNVHMCRGTAGCHV
B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892
0.799
0.896
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ISCW005884-PA
C2H2 ZF
254
276
FICKFCQRRFTKSYNLLIHERTH
ISCW005884-PA
C2H2 ZF
282
304
YTCDICHKAFRRQDHLRDHRYIH
ISCW005884-PA
C2H2 ZF
310
332
FKCGECGKGFCQSRTLAVHRILH
ISCW005884-PA
C2H2 ZF
338
360
HKCPTCGRSFNQRSNLKTHLLTH
ISCW005884-PA
C2H2 ZF
366
388
YHCPACGKVFRRNCDLRRHALTH
Links
Other
C2H2 ZF
family TFs
Other
Ixodes scapularis
TFs
108 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy