KLLA0_C17072g (Kluyveromyces lactis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 KLLA0_C17072g T120680_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
KLLA0_C17072g
M01038_2.00
Kluyveromyces lactis
CYCCTDDNN

NNHHAGGRG
PBM
Siggers et al.(2014)
KLL0C17072gKlac
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
COM2
M00024_2.00
Saccharomyces cerevisiae
VCCCCTDT

AHAGGGGB
PBM
Badis et al.(2008)
YER130C_2103
0.771 0.804
COM2
M01530_2.00
Saccharomyces cerevisiae
YYYYKNWHN

NDWNMRRRR
PBM
Zhu et al.(2009)
Yer130c
0.771 0.804
COM2
M07454_2.00
Saccharomyces cerevisiae
NCCCCTWTH

DAWAGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0423.1
0.771 0.804
COM2
M08521_2.00
Saccharomyces cerevisiae
NCCCCTWTH

DAWAGGGGN
Misc
DeBoer et al.(2011)
YER130C_534
0.771 0.804
CAGL0F05995g
M01032_2.00
Candida glabrata
NYCCYYNN

NNRRGGRN
PBM
Siggers et al.(2014)
CAGL0F05995gCgla
0.761 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01038_2.00 C2H2 ZF 18 41
M01038_2.00 C2H2 ZF 47 69

DNA Binding Domains

Protein ID Domain From To Sequence
CAH01814 C2H2 ZF 418 441
CAH01814 C2H2 ZF 447 469

Links

Other C2H2 ZF family TFs
Other Kluyveromyces lactis TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BRADI2G57940 Brachypodium distachyon BRADI2G57940 N 0.000
ORGLA01G0347800 Oryza glaberrima ORGLA01G0347800 N 0.000
Pavir.J09064 Panicum virgatum Pavir.J09064 N 0.000
Si000959m.g Setaria italica Si000959m.g N 0.000
Sb03g043030 Sorghum bicolor Sb03g043030 N 0.000
TRAES3BF071100020CFD_g Triticum aestivum TRAES3BF071100020CFD_g N 0.000
TRAES3BF071100040CFD_g Triticum aestivum TRAES3BF071100040CFD_g N 0.000