CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KLTH0G12254g
(
Lachancea thermotolerans
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
KLTH0G12254g
T120718_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SWI5
M00020_2.00
Saccharomyces cerevisiae
NNKGCTGGTHN
NDACCAGCMNN
PBM
Badis et al.(2008)
SWI5_2037
0.757
0.776
SWI5
M07450_2.00
Saccharomyces cerevisiae
KGCTGGKH
DMCCAGCM
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0402.1
0.757
0.776
SWI5
M08516_2.00
Saccharomyces cerevisiae
KGCTGGKH
DMCCAGCM
Misc
DeBoer et al.(2011)
YDR146C_569
0.757
0.776
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAR25128
C2H2 ZF
583
607
FECLHPDCGKNFRRRYNIRSHIQTH
CAR25128
C2H2 ZF
613
637
YICDFPDCNKAFVRNHDLIRHKKTH
CAR25128
C2H2 ZF
640
662
KCYICPCGKKFVREDALLVHRSR
Links
Other
C2H2 ZF
family TFs
Other
Lachancea thermotolerans
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy