CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KNAG_0G01870
(
Kazachstania naganishii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
KNAG_0G01870
T120748_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RPH1
M00025_2.00
Saccharomyces cerevisiae
NNHCCCCTAAN
NTTAGGGGDNN
PBM
Badis et al.(2008)
RPH1_4571
0.798
0.889
RPH1
M01531_2.00
Saccharomyces cerevisiae
YNMCCCCTWWWW
WWWWAGGGGKNR
PBM
Zhu et al.(2009)
Rph1
0.798
0.889
RPH1
M07455_2.00
Saccharomyces cerevisiae
NCCCCTWA
TWAGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0372.1
0.798
0.889
RPH1
M08522_2.00
Saccharomyces cerevisiae
NCCCCTWA
TWAGGGGN
Misc
DeBoer et al.(2011)
YER169W_547
0.798
0.889
GIS1
M00019_2.00
Saccharomyces cerevisiae
NCCCCTWDNN
NNHWAGGGGN
PBM
Badis et al.(2008)
GIS1_4481
0.792
0.889
GIS1
M07449_2.00
Saccharomyces cerevisiae
HCCCCTWDN
NHWAGGGGD
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0306.1
0.792
0.889
GIS1
M08515_2.00
Saccharomyces cerevisiae
HCCCCTWDN
NHWAGGGGD
Misc
DeBoer et al.(2011)
YDR096W_562
0.792
0.889
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCK71244
C2H2 ZF
760
783
YVCQECKRQFSSGHHLTRHKKSVH
CCK71244
C2H2 ZF
789
810
YSCPKCGKRFKRRDHVLQHLNK
Links
Other
C2H2 ZF
family TFs
Other
Kazachstania naganishii
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy