CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LALA0_S03e01288g
(
Lachancea lanzarotensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
LALA0_S03e01288g
T121247_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CRZ1
M00038_2.00
Saccharomyces cerevisiae
NNDCTRHGCCNN
NNGGCDYAGHNN
PBM
Badis et al.(2008)
CRZ1_4531
0.804
0.912
CRZ1
M07468_2.00
Saccharomyces cerevisiae
NNVMGCCHC
GDGGCKBNN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0285.1
0.804
0.912
CRZ1
M08541_2.00
Saccharomyces cerevisiae
NNVMGCCHC
GDGGCKBNN
Misc
DeBoer et al.(2011)
YNL027W_516
0.804
0.912
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CEP61368
C2H2 ZF
433
455
YACHVCDKKFTRPYNLKSHLRTH
CEP61368
C2H2 ZF
461
483
FVCSICGKAFARQHDRKRHEDLH
CEP61368
C2H2 ZF
489
519
YVCQGKLKDGSQWGCGKKFARSDALGRHLKT
Links
Other
C2H2 ZF
family TFs
Other
Lachancea lanzarotensis
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ERF017
Arabidopsis thaliana
AT1G19210
D
0.000
ERF018
Arabidopsis thaliana
AT1G74930
D
0.000
ORA47
Vitis vinifera
VIT_04s0008g02230
I
0.000
Cucsa.271180
Cucumis sativus
Cucsa.271180
I
0.000
mgf021940m
Mimulus guttatus
mgf021940m
I
0.000
mgf024162m
Mimulus guttatus
mgf024162m
I
0.000
mgf025452m
Mimulus guttatus
mgf025452m
I
0.000
Aquca_076_00039
Aquilegia coerulea
Aquca_076_00039
I
0.000
Bostr.26527s0082
Boechera stricta
Bostr.26527s0082
I
0.000
Bostr.3288s0141
Boechera stricta
Bostr.3288s0141
I
0.000
Bostr.7128s0526
Boechera stricta
Bostr.7128s0526
I
0.000
Cagra.0402s0035
Capsella grandiflora
Cagra.0402s0035
I
0.000
Cagra.1961s0079
Capsella grandiflora
Cagra.1961s0079
I
0.000
Carubv10001903m.g
Capsella rubella
Carubv10001903m.g
I
0.000
Carubv10011394m.g
Capsella rubella
Carubv10011394m.g
I
0.000
Carubv10020965m.g
Capsella rubella
Carubv10020965m.g
I
0.000
Cucsa.141980
Cucumis sativus
Cucsa.141980
I
0.000
Cucsa.055920
Cucumis sativus
Cucsa.055920
I
0.000
cassava25057.valid.m1
Manihot esculenta
cassava25057.valid.m1
I
0.000
VIT_11s0016g00660
Vitis vinifera
VIT_11s0016g00660
I
0.000
Ca_01683
Cicer arietinum
Ca_01683
I
0.000
Ca_09124
Cicer arietinum
Ca_09124
I
0.000
Ca_19295
Cicer arietinum
Ca_19295
I
0.000
Ca_19296
Cicer arietinum
Ca_19296
I
0.000
Cla007584
Citrullus lanatus
Cla007584
I
0.000
Cla011318
Citrullus lanatus
Cla011318
I
0.000
Cla022291
Citrullus lanatus
Cla022291
I
0.000
Pm027117
Prunus mume
Pm027117
I
0.000
29739.m003647
Ricinus communis
29739.m003647
I
0.000
29739.m003716
Ricinus communis
29739.m003716
I
0.000
cassava10604.m1
Manihot esculenta
cassava10604.m1
I
0.000
cassava20547.m1
Manihot esculenta
cassava20547.m1
I
0.000
Ciclev10009540m.g
Citrus clementina
Ciclev10009540m.g
I
0.000
Ciclev10010348m.g
Citrus clementina
Ciclev10010348m.g
I
0.000
Eucgr.C00780
Eucalyptus grandis
Eucgr.C00780
I
0.000
orange1.1g029068m.g
Citrus sinensis
orange1.1g029068m.g
I
0.000
Pavir.Aa00296
Panicum virgatum
Pavir.Aa00296
I
0.000
Pavir.J00593
Panicum virgatum
Pavir.J00593
I
0.000
SapurV1A.0057s0300
Salix purpurea
SapurV1A.0057s0300
I
0.000
SapurV1A.0373s0040
Salix purpurea
SapurV1A.0373s0040
I
0.000
SapurV1A.0521s0050
Salix purpurea
SapurV1A.0521s0050
I
0.000
SapurV1A.2229s0010
Salix purpurea
SapurV1A.2229s0010
I
0.000
Thhalv10009812m.g
Eutrema salsugineum
Thhalv10009812m.g
I
0.000
Thhalv10015465m.g
Eutrema salsugineum
Thhalv10015465m.g
I
0.000
Thhalv10019652m.g
Eutrema salsugineum
Thhalv10019652m.g
I
0.000
PK18548.1
Cannabis sativa
PK18548.1
I
0.000
chr1.CM0133.1010.nc
Lotus japonicus
chr1.CM0133.1010.nc
I
0.000
chr5.CM0040.40.nd
Lotus japonicus
chr5.CM0040.40.nd
I
0.000
MDP0000704216
Malus domestica
MDP0000704216
I
0.000
MDP0000649022
Malus domestica
MDP0000649022
I
0.000
Lus10038082.g
Linum usitatissimum
Lus10038082.g
I
0.000
Eucgr.C03175
Eucalyptus grandis
Eucgr.C03175
I
0.000
Eucgr.C03297
Eucalyptus grandis
Eucgr.C03297
I
0.000
evm.TU.supercontig_266.5
Carica papaya
evm.TU.supercontig_266.5
I
0.000
gene12919-v1.0-hybrid
Fragaria vesca
gene12919-v1.0-hybrid
I
0.000
Gorai.001G016800
Gossypium raimondii
Gorai.001G016800
I
0.000
Gorai.001G019100
Gossypium raimondii
Gorai.001G019100
I
0.000
Gorai.004G285200
Gossypium raimondii
Gorai.004G285200
I
0.000
Gorai.004G285900
Gossypium raimondii
Gorai.004G285900
I
0.000
Gorai.010G091100
Gossypium raimondii
Gorai.010G091100
I
0.000
Gorai.013G222700
Gossypium raimondii
Gorai.013G222700
I
0.000
Lus10009798.g
Linum usitatissimum
Lus10009798.g
I
0.000
Lus10033420.g
Linum usitatissimum
Lus10033420.g
I
0.000
Lus10034885.g
Linum usitatissimum
Lus10034885.g
I
0.000
chr6.CM0420.30.nd
Lotus japonicus
chr6.CM0420.30.nd
I
0.000
AMTR_s00007p00268280
Amborella trichopoda
AMTR_s00007p00268280
I
0.000
Bra031069
Brassica rapa
Bra031069
I
0.000
fgenesh2_kg.1__2098__AT1G19210.1
Arabidopsis lyrata
fgenesh2_kg.1__2098__AT1G19210.1
I
0.000
ORA47
Arabidopsis lyrata
fgenesh2_kg.2__1761__AT1G74930.1
I
0.000
GLYMA04G06095
Glycine max
GLYMA04G06095
I
0.000
GLYMA06G06101
Glycine max
GLYMA06G06101
I
0.000
GLYMA09G08330
Glycine max
GLYMA09G08330
I
0.000
GLYMA13G17250
Glycine max
GLYMA13G17250
I
0.000
GLYMA14G12505
Glycine max
GLYMA14G12505
I
0.000
GLYMA15G19910
Glycine max
GLYMA15G19910
I
0.000
GLYMA17G05240
Glycine max
GLYMA17G05240
I
0.000
GLYMA17G33535
Glycine max
GLYMA17G33535
I
0.000
GRMZM2G097081
Zea mays
GRMZM2G097081
I
0.000
GSMUA_Achr5G05160_001
Musa acuminata
GSMUA_Achr5G05160_001
I
0.000
Bra025719
Brassica rapa
Bra025719
I
0.000
Bra020162
Brassica rapa
Bra020162
I
0.000
Bra016518
Brassica rapa
Bra016518
I
0.000
ERF016
Arabidopsis thaliana
AT5G21960
I
0.000
BGIOSGA005486
Oryza indica
BGIOSGA005486
I
0.000
Bo2g023630
Brassica oleracea
Bo2g023630
I
0.000
Bo3g015600
Brassica oleracea
Bo3g015600
I
0.000
Bo6g086740
Brassica oleracea
Bo6g086740
I
0.000
Bo6g119120
Brassica oleracea
Bo6g119120
I
0.000
Bo8g068370
Brassica oleracea
Bo8g068370
I
0.000
Bo8g102870
Brassica oleracea
Bo8g102870
I
0.000
Bo9g149820
Brassica oleracea
Bo9g149820
I
0.000
Bra002377
Brassica rapa
Bra002377
I
0.000
Bra003780
Brassica rapa
Bra003780
I
0.000
Bra006599
Brassica rapa
Bra006599
I
0.000
Bra015882
Brassica rapa
Bra015882
I
0.000
GSMUA_Achr9G14360_001
Musa acuminata
GSMUA_Achr9G14360_001
I
0.000
LPERR02G28660
Leersia perrieri
LPERR02G28660
I
0.000
MTR_1g014780
Medicago truncatula
MTR_1g014780
I
0.000
PGSC0003DMG400002899
Solanum tuberosum
PGSC0003DMG400002899
I
0.000
PGSC0003DMG400030781
Solanum tuberosum
PGSC0003DMG400030781
I
0.000
POPTR_0006s14090
Populus trichocarpa
POPTR_0006s14090
I
0.000
POPTR_0006s14100
Populus trichocarpa
POPTR_0006s14100
I
0.000
POPTR_0006s23480
Populus trichocarpa
POPTR_0006s23480
I
0.000
POPTR_0018s08320
Populus trichocarpa
POPTR_0018s08320
I
0.000
PRUPE_ppa011336mg
Prunus persica
PRUPE_ppa011336mg
I
0.000
scaffold_602234.1
Arabidopsis lyrata
scaffold_602234.1
I
0.000
Si019636m.g
Setaria italica
Si019636m.g
I
0.000
Solyc06g054630.1
Solanum lycopersicum
Solyc06g054630.1
I
0.000
Solyc12g009240.1
Solanum lycopersicum
Solyc12g009240.1
I
0.000
TCM_037415
Theobroma cacao
TCM_037415
I
0.000
TCM_037486
Theobroma cacao
TCM_037486
I
0.000
OS02G0781300
Oryza sativa
OS02G0781300
I
0.000
ORUFI02G36340
Oryza rufipogon
ORUFI02G36340
I
0.000
ORGLA02G0301600
Oryza glaberrima
ORGLA02G0301600
I
0.000
MTR_1g014800
Medicago truncatula
MTR_1g014800
I
0.000
MTR_1g014820
Medicago truncatula
MTR_1g014820
I
0.000
MTR_1g014860
Medicago truncatula
MTR_1g014860
I
0.000
MTR_2g043020
Medicago truncatula
MTR_2g043020
I
0.000
MTR_2g043030
Medicago truncatula
MTR_2g043030
I
0.000
MTR_2g043040
Medicago truncatula
MTR_2g043040
I
0.000
MTR_2g043050
Medicago truncatula
MTR_2g043050
I
0.000
MTR_3g105480
Medicago truncatula
MTR_3g105480
I
0.000
MTR_3g105510
Medicago truncatula
MTR_3g105510
I
0.000
OGLUM02G35980
Oryza glumaepatula
OGLUM02G35980
I
0.000
OMERI01G37050
Oryza meridionalis
OMERI01G37050
I
0.000
ONIVA02G36910
Oryza nivara
ONIVA02G36910
I
0.000
OPUNC02G32160
Oryza punctata
OPUNC02G32160
I
0.000
Traes_6DL_FA861D610
Triticum aestivum
Traes_6DL_FA861D610
I
0.000