CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LotgiG102775
(
Lottia gigantea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
LotgiG102775
T121573_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
odd-2
M00618_2.00
Caenorhabditis elegans
NGCTACYGK
MCRGTAGCN
PBM
Narasimhan et al.(2015)
pTH9150
0.774
0.903
Osr2
M00132_2.00
Mus musculus
NGCTWCYGNN
NNCRGWAGCN
PBM
Badis et al.(2009)
Osr2_1727
0.771
0.903
Osr1
M00144_2.00
Mus musculus
NVCTHCYNN
NNRGDAGBN
PBM
Badis et al.(2009)
Osr1_3033
0.771
0.903
Osr1
M01174_2.00
Mus musculus
GCTACYGT
ACRGTAGC
PBM
Lambert et al.(2019)
pTH5339
0.771
0.903
OSR1
M04477_2.00
Homo sapiens
NGCTACYGTD
HACRGTAGCN
SELEX
Yin et al.(2017)
OSR1_eDBD_HT-SELEX
0.771
0.903
OSR1
M04478_2.00
Homo sapiens
NGCTACYGTD
HACRGTAGCN
SELEX
Yin et al.(2017)
OSR1_eDBD_Methyl-HT-SELEX
0.771
0.903
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LotgiP102775
C2H2 ZF
1
16
RHFTKSYNLLIHERTH
LotgiP102775
C2H2 ZF
22
44
YSCDVCNKAFRRQDHLRDHKYIH
LotgiP102775
C2H2 ZF
50
72
FKCLECGKGFCQSRTLAVHKALH
Links
Other
C2H2 ZF
family TFs
Other
Lottia gigantea
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy