LotgiG155751 (Lottia gigantea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 LotgiG155751 T121688_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
gl
M03671_2.00
Drosophila melanogaster
RTTACCATACAAGTGCAV

BTGCACTTGTATGGTAAY
SELEX
Nitta et al.(2015)
gl_1
0.794 0.895
gl
M06078_2.00
Drosophila melanogaster
DAYNCWTBAAAT

ATTTVAWGNRTH
B1H
Zhu et al.(2011)
gl_FlyReg_FBgn0004618
0.794 0.895
gl
M06079_2.00
Drosophila melanogaster
TTRTABGGYTTC

GAARCCVTAYAA
B1H
Zhu et al.(2011)
gl_SANGER_5_FBgn0004618
0.794 0.895
gl
M06080_2.00
Drosophila melanogaster
NNBDWNTADGGCTTC

GAAGCCHTANWHVNN
B1H
Zhu et al.(2011)
gl_SOLEXA_5_FBgn0004618
0.794 0.895
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP155751 C2H2 ZF 5 26
LotgiP155751 C2H2 ZF 32 54
LotgiP155751 C2H2 ZF 60 82
LotgiP155751 C2H2 ZF 88 110
LotgiP155751 C2H2 ZF 116 138

Links

Other C2H2 ZF family TFs
Other Lottia gigantea TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29838.m001690 Ricinus communis 29838.m001690 I 0.000
AMTR_s00053p00228660 Amborella trichopoda AMTR_s00053p00228660 I 0.000
AMTR_s00127p00060060 Amborella trichopoda AMTR_s00127p00060060 I 0.000
Aquca_015_00177 Aquilegia coerulea Aquca_015_00177 I 0.000
SVP Arabidopsis thaliana AT2G22540 D 0.000
AGL24 Arabidopsis thaliana AT4G24540 I 0.000
BGIOSGA011317 Oryza indica BGIOSGA011317 I 0.000
BGIOSGA015023 Oryza indica BGIOSGA015023 I 0.000
Bo1g039080 Brassica oleracea Bo1g039080 I 0.000
Bo4g149800 Brassica oleracea Bo4g149800 I 0.000
Bo7g109590 Brassica oleracea Bo7g109590 I 0.000
Bo8g101000 Brassica oleracea Bo8g101000 I 0.000
Bostr.19427s0024 Boechera stricta Bostr.19427s0024 I 0.000
Bostr.7867s0261 Boechera stricta Bostr.7867s0261 I 0.000
Bra013812 Brassica rapa Bra013812 I 0.000
Bra019221 Brassica rapa Bra019221 I 0.000
Bra030228 Brassica rapa Bra030228 I 0.000
Bra038511 Brassica rapa Bra038511 I 0.000
Cagra.1080s0011 Capsella grandiflora Cagra.1080s0011 I 0.000
Cagra.2171s0007 Capsella grandiflora Cagra.2171s0007 I 0.000
Carubv10005653m.g Capsella rubella Carubv10005653m.g I 0.000
Carubv10023941m.g Capsella rubella Carubv10023941m.g I 0.000
cassava1567.valid.m1 Manihot esculenta cassava1567.valid.m1 I 0.000
cassava31070.valid.m1 Manihot esculenta cassava31070.valid.m1 I 0.000
cassava31071.valid.m1 Manihot esculenta cassava31071.valid.m1 I 0.000
cassava42879.valid.m1 Manihot esculenta cassava42879.valid.m1 I 0.000
Ca_12416 Cicer arietinum Ca_12416 I 0.000
Ca_19854 Cicer arietinum Ca_19854 I 0.000
Ca_21060 Cicer arietinum Ca_21060 I 0.000
Ciclev10026457m.g Citrus clementina Ciclev10026457m.g I 0.000
Ciclev10029776m.g Citrus clementina Ciclev10029776m.g I 0.000
Cla014322 Citrullus lanatus Cla014322 I 0.000
Cla022499 Citrullus lanatus Cla022499 I 0.000
Cucsa.104010 Cucumis sativus Cucsa.104010 I 0.000
Cucsa.160640 Cucumis sativus Cucsa.160640 I 0.000
ENSMICG00000005703 Microcebus murinus ENSMICG00000005703 I 0.000
Mef2c Mus musculus ENSMUSG00000005583 D 0.000
Eucgr.F00420 Eucalyptus grandis Eucgr.F00420 I 0.000
Eucgr.F02141 Eucalyptus grandis Eucgr.F02141 I 0.000
Eucgr.F02145 Eucalyptus grandis Eucgr.F02145 I 0.000
Eucgr.F02146 Eucalyptus grandis Eucgr.F02146 I 0.000
evm.TU.contig_33612 Carica papaya evm.TU.contig_33612 I 0.000
evm.TU.supercontig_21.11 Carica papaya evm.TU.supercontig_21.11 I 0.000
evm.TU.supercontig_55.31 Carica papaya evm.TU.supercontig_55.31 I 0.000
e_gw1.171.4.1 Physcomitrella patens e_gw1.171.4.1 I 0.000
e_gw1.209.37.1 Physcomitrella patens e_gw1.209.37.1 I 0.000
SVP Arabidopsis lyrata fgenesh2_kg.4__174__AT2G22540.1 I 0.000
AGL24 Arabidopsis lyrata fgenesh2_kg.7__1822__AT4G24540.1 I 0.000
gene03714-v1.0-hybrid Fragaria vesca gene03714-v1.0-hybrid I 0.000
gene03748-v1.0-hybrid Fragaria vesca gene03748-v1.0-hybrid I 0.000
gene05027-v1.0-hybrid Fragaria vesca gene05027-v1.0-hybrid I 0.000
gene11073-v1.0-hybrid Fragaria vesca gene11073-v1.0-hybrid N 0.000
gene12119-v1.0-hybrid Fragaria vesca gene12119-v1.0-hybrid I 0.000
gene12120-v1.0-hybrid Fragaria vesca gene12120-v1.0-hybrid I 0.000
gene20808-v1.0-hybrid Fragaria vesca gene20808-v1.0-hybrid I 0.000
GLYMA01G02880 Glycine max GLYMA01G02880 I 0.000
GLYMA02G04710 Glycine max GLYMA02G04710 I 0.000
GLYMA02G33040 Glycine max GLYMA02G33040 I 0.000
GLYMA04G10015 Glycine max GLYMA04G10015 I 0.000
GLYMA06G10020 Glycine max GLYMA06G10020 I 0.000
GLYMA11G16105 Glycine max GLYMA11G16105 I 0.000
GLYMA15G06302 Glycine max GLYMA15G06302 I 0.000
Gorai.002G142700 Gossypium raimondii Gorai.002G142700 I 0.000
Gorai.005G225500 Gossypium raimondii Gorai.005G225500 I 0.000
Gorai.008G017200 Gossypium raimondii Gorai.008G017200 I 0.000
Gorai.008G092300 Gossypium raimondii Gorai.008G092300 I 0.000
Gorai.010G035000 Gossypium raimondii Gorai.010G035000 I 0.000
Gorai.013G055700 Gossypium raimondii Gorai.013G055700 I 0.000
GRMZM2G059102 Zea mays GRMZM2G059102 I 0.000
GSMUA_Achr10G19290_001 Musa acuminata GSMUA_Achr10G19290_001 I 0.000
GSMUA_Achr3G06800_001 Musa acuminata GSMUA_Achr3G06800_001 I 0.000
GSMUA_Achr9G15180_001 Musa acuminata GSMUA_Achr9G15180_001 I 0.000
LjT38P01.180.nd Lotus japonicus LjT38P01.180.nd I 0.000
Lus10005325.g Linum usitatissimum Lus10005325.g I 0.000
Lus10025719.g Linum usitatissimum Lus10025719.g I 0.000
Lus10035942.g Linum usitatissimum Lus10035942.g I 0.000
Lus10039580.g Linum usitatissimum Lus10039580.g I 0.000
MDP0000135652 Malus domestica MDP0000135652 I 0.000
MDP0000143531 Malus domestica MDP0000143531 N 0.000
MDP0000144516 Malus domestica MDP0000144516 I 0.000
MDP0000209705 Malus domestica MDP0000209705 I 0.000
MDP0000233948 Malus domestica MDP0000233948 I 0.000
MDP0000255146 Malus domestica MDP0000255146 I 0.000
MDP0000259294 Malus domestica MDP0000259294 I 0.000
MDP0000277582 Malus domestica MDP0000277582 N 0.000
MDP0000311107 Malus domestica MDP0000311107 N 0.000
MDP0000322567 Malus domestica MDP0000322567 I 0.000
MDP0000378412 Malus domestica MDP0000378412 I 0.000
mgf015964m Mimulus guttatus mgf015964m I 0.000
MTR_1g053070 Medicago truncatula MTR_1g053070 I 0.000
MTR_5g032150 Medicago truncatula MTR_5g032150 I 0.000
MTR_5g032520 Medicago truncatula MTR_5g032520 I 0.000
OB11G21480 Oryza brachyantha OB11G21480 I 0.000
OBART03G06320 Oryza barthii OBART03G06320 I 0.000
OGLUM03G06330 Oryza glumaepatula OGLUM03G06330 I 0.000
OMERI03G06190 Oryza meridionalis OMERI03G06190 I 0.000
ONIVA02G06550 Oryza nivara ONIVA02G06550 I 0.000
OPUNC03G06100 Oryza punctata OPUNC03G06100 I 0.000
orange1.1g027190m.g Citrus sinensis orange1.1g027190m.g I 0.000
orange1.1g034384m.g Citrus sinensis orange1.1g034384m.g I 0.000
orange1.1g040972m.g Citrus sinensis orange1.1g040972m.g I 0.000
ORGLA03G0061100 Oryza glaberrima ORGLA03G0061100 I 0.000
ORUFI03G06210 Oryza rufipogon ORUFI03G06210 I 0.000
OS03G0186600 Oryza sativa OS03G0186600 I 0.000
Pavir.Ia04527 Panicum virgatum Pavir.Ia04527 I 0.000
PGSC0003DMG400009363 Solanum tuberosum PGSC0003DMG400009363 I 0.000
PGSC0003DMG400016203 Solanum tuberosum PGSC0003DMG400016203 I 0.000
PGSC0003DMG400033570 Solanum tuberosum PGSC0003DMG400033570 I 0.000
PGSC0003DMG401006771 Solanum tuberosum PGSC0003DMG401006771 I 0.000
PK20651.1 Cannabis sativa PK20651.1 I 0.000
Pm002166 Prunus mume Pm002166 I 0.000
Pm004415 Prunus mume Pm004415 I 0.000
Pm004416 Prunus mume Pm004416 I 0.000
Pm004417 Prunus mume Pm004417 I 0.000
Pm004418 Prunus mume Pm004418 I 0.000
Pm004419 Prunus mume Pm004419 I 0.000
Pm004420 Prunus mume Pm004420 I 0.000
Pm022002 Prunus mume Pm022002 I 0.000
POPTR_0001s33600 Populus trichocarpa POPTR_0001s33600 I 0.000
POPTR_0002s10570 Populus trichocarpa POPTR_0002s10570 I 0.000
POPTR_0007s03270 Populus trichocarpa POPTR_0007s03270 I 0.000
POPTR_0007s03290 Populus trichocarpa POPTR_0007s03290 I 0.000
POPTR_0007s14300 Populus trichocarpa POPTR_0007s14300 I 0.000
POPTR_0017s07170 Populus trichocarpa POPTR_0017s07170 I 0.000
PRUPE_ppa010714mg Prunus persica PRUPE_ppa010714mg I 0.000
PRUPE_ppa010758mg Prunus persica PRUPE_ppa010758mg I 0.000
PRUPE_ppa010822mg Prunus persica PRUPE_ppa010822mg I 0.000
PRUPE_ppa011063mg Prunus persica PRUPE_ppa011063mg I 0.000
PRUPE_ppa011123mg Prunus persica PRUPE_ppa011123mg I 0.000
PRUPE_ppa018667mg Prunus persica PRUPE_ppa018667mg I 0.000
PRUPE_ppa022274mg Prunus persica PRUPE_ppa022274mg I 0.000
PRUPE_ppb017585mg Prunus persica PRUPE_ppb017585mg I 0.000
SapurV1A.0004s1140 Salix purpurea SapurV1A.0004s1140 I 0.000
SapurV1A.0068s0650 Salix purpurea SapurV1A.0068s0650 I 0.000
SapurV1A.0187s0010 Salix purpurea SapurV1A.0187s0010 I 0.000
SapurV1A.0228s0130 Salix purpurea SapurV1A.0228s0130 I 0.000
SapurV1A.0278s0350 Salix purpurea SapurV1A.0278s0350 I 0.000
SapurV1A.0463s0130 Salix purpurea SapurV1A.0463s0130 I 0.000
SapurV1A.1777s0020 Salix purpurea SapurV1A.1777s0020 I 0.000
SapurV1A.4677s0010 Salix purpurea SapurV1A.4677s0010 I 0.000
Sb01g044810 Sorghum bicolor Sb01g044810 I 0.000
Si037358m.g Setaria italica Si037358m.g I 0.000
Solyc01g087990.2 Solanum lycopersicum Solyc01g087990.2 I 0.000
Solyc01g105800.2 Solanum lycopersicum Solyc01g105800.2 I 0.000
Solyc11g010570.1 Solanum lycopersicum Solyc11g010570.1 I 0.000
TCM_000992 Theobroma cacao TCM_000992 I 0.000
TCM_007378 Theobroma cacao TCM_007378 I 0.000
TCM_034501 Theobroma cacao TCM_034501 I 0.000
Thhalv10000308m.g Eutrema salsugineum Thhalv10000308m.g I 0.000
Thhalv10026757m.g Eutrema salsugineum Thhalv10026757m.g I 0.000
Traes_4BL_410DEBFD3 Triticum aestivum Traes_4BL_410DEBFD3 I 0.000
Traes_7AS_C25A349A9 Triticum aestivum Traes_7AS_C25A349A9 I 0.000
Traes_7BS_592EC3AB1 Triticum aestivum Traes_7BS_592EC3AB1 I 0.000
Traes_7DS_D435DF316 Triticum aestivum Traes_7DS_D435DF316 I 0.000
TRIUR3_24374 Triticum urartu TRIUR3_24374 I 0.000
SVP Vitis vinifera VIT_00s0313g00070 I 0.000
VIT_03s0017g00360 Vitis vinifera VIT_03s0017g00360 I 0.000
VIT_03s0017g00450 Vitis vinifera VIT_03s0017g00450 I 0.000
VIT_15s0024g02000 Vitis vinifera VIT_15s0024g02000 I 0.000
VIT_15s0107g00120 Vitis vinifera VIT_15s0107g00120 I 0.000
AGL24 Vitis vinifera VIT_18s0001g07460 I 0.000