CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LotgiG155751
(
Lottia gigantea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
LotgiG155751
T121688_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
gl
M03671_2.00
Drosophila melanogaster
RTTACCATACAAGTGCAV
BTGCACTTGTATGGTAAY
SELEX
Nitta et al.(2015)
gl_1
0.794
0.895
gl
M06078_2.00
Drosophila melanogaster
DAYNCWTBAAAT
ATTTVAWGNRTH
B1H
Zhu et al.(2011)
gl_FlyReg_FBgn0004618
0.794
0.895
gl
M06079_2.00
Drosophila melanogaster
TTRTABGGYTTC
GAARCCVTAYAA
B1H
Zhu et al.(2011)
gl_SANGER_5_FBgn0004618
0.794
0.895
gl
M06080_2.00
Drosophila melanogaster
NNBDWNTADGGCTTC
GAAGCCHTANWHVNN
B1H
Zhu et al.(2011)
gl_SOLEXA_5_FBgn0004618
0.794
0.895
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LotgiP155751
C2H2 ZF
5
26
FCRICGKTYARPSTLKTHLRTH
LotgiP155751
C2H2 ZF
32
54
YKCHICSKSFSQAANLTAHTRTH
LotgiP155751
C2H2 ZF
60
82
FRCPVCERRFSQSSSVTTHMRTH
LotgiP155751
C2H2 ZF
88
110
YRCRLCKKAFSDSSTLTKHLRIH
LotgiP155751
C2H2 ZF
116
138
YQCKLCLLRFSQSGNLNRHMRVH
Links
Other
C2H2 ZF
family TFs
Other
Lottia gigantea
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy