CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LotgiG222832
(
Lottia gigantea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
LotgiG222832
T121770_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zfp143
M09010_2.00
Mus musculus
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_MOUSE.H11MO.0.A
0.769
0.851
ZNF143
M02899_2.00
Homo sapiens
YWCCCAYAATGCAYYG
CRRTGCATTRTGGGWR
SELEX
Jolma et al.(2013)
ZNF143_1
0.769
0.845
ZNF143
M07931_2.00
Homo sapiens
RACTACAWYTCCCAG
CTGGGARWTGTAGTY
ChIP-seq
Gerstein et al.(2012)
GM12878_ZNF143_Stanford
0.769
0.845
ZNF143
M08910_2.00
Homo sapiens
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_HUMAN.H11MO.0.A
0.769
0.845
ZNF143
M09510_2.00
Homo sapiens
NNYTCCCAKVAKSCH
DGSMTBMTGGGARNN
Misc
Heinz et al.(2010)
CUTLL-ZNF143_GSE29600
0.769
0.845
ZNF143
M10247_2.00
Homo sapiens
NYYWCCCABMATGCAHYRCRNB
VNYGYRDTGCATKVTGGGWRRN
Transfac
Matys et al.(2006)
V$STAF_01
0.769
0.845
ZNF143
M10248_2.00
Homo sapiens
MHBWCCCAKVRTBCMWHGMRV
BYKCDWKGVAYBMTGGGWVDK
Transfac
Matys et al.(2006)
V$STAF_02
0.769
0.845
ZNF143
M10249_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAF_Q4_01
0.769
0.845
ZNF76
M04398_2.00
Homo sapiens
NNHWCCCABAATGCAHYRCRN
NYGYRDTGCATTVTGGGWDNN
SELEX
Yin et al.(2017)
ZNF76_eDBD_HT-SELEX
0.769
0.851
ZNF76
M08278_2.00
Homo sapiens
BCSCRNDGSMTBCTGGGARNT
ANYTCCCAGVAKSCHNYGSGV
ChIP-seq
Schmitges et al.(2016)
P36508_1-7.RCADE
0.769
0.851
ZNF76
M08856_2.00
Homo sapiens
ACTMCMHYTCCCAGVRKSCHHY
RDDGSMYBCTGGGARDKGKAGT
Misc
Kulakovskiy et al.(2013)
ZNF76_HUMAN.H11MO.0.C
0.769
0.851
ZNF76
M04399_2.00
Homo sapiens
NYTWCCCAYAATGCAHYRCDN
NHGYRDTGCATTRTGGGWARN
SELEX
Yin et al.(2017)
ZNF76_eDBD_Methyl-HT-SELEX
0.769
0.851
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LotgiP222832
C2H2 ZF
183
207
FRCMYGNCGRLYTTLHHLKVHERSH
LotgiP222832
C2H2 ZF
213
237
FKCDFIQCGKAFATGYGLKSHRRVH
LotgiP222832
C2H2 ZF
243
267
YKCQENGCDKAFKTSGDLQKHVRTH
LotgiP222832
C2H2 ZF
273
297
FKCPFEGCTRSFTTSNIRKVHIRTH
LotgiP222832
C2H2 ZF
303
327
YNCTEEGCGRSFASATNYKNHVRIH
LotgiP222832
C2H2 ZF
333
357
YVCTVTGCGKRFTEYSSLYKHHVVH
LotgiP222832
C2H2 ZF
363
386
YECGHCGKTYRQTSTLAMHKRTAH
Links
Other
C2H2 ZF
family TFs
Other
Lottia gigantea
TFs
113 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMAR015659
Strigamia maritima
SMAR015659
I
0.794
Ocbimv22038914m.g
Octopus bimaculoides
Ocbimv22038914m.g
I
0.791
Sakowv30036637m.g
Saccoglossus kowalevskii
Sakowv30036637m.g
I
0.790
Sakowv30044960m.g
Saccoglossus kowalevskii
Sakowv30044960m.g
I
0.790
ENSLOCG00000011655
Lepisosteus oculatus
ENSLOCG00000011655
I
0.782
znf76
Danio rerio
ENSDARG00000013279
I
0.774
BGLB001048
Biomphalaria glabrata
BGLB001048
I
0.772
ENSFALG00000003698
Ficedula albicollis
ENSFALG00000003698
I
0.770
ZNF76
Taeniopygia guttata
ENSTGUG00000001745
I
0.770
Gfo_R002960
Geospiza fortis
Gfo_R002960
I
0.770
ENSLOCG00000003619
Lepisosteus oculatus
ENSLOCG00000003619
I
0.770
ZNF143
Monodelphis domestica
ENSMODG00000007909
I
0.770
ENSPANG00000002501
Papio anubis
ENSPANG00000002501
I
0.769
ENSSHAG00000009934
Sarcophilus harrisii
ENSSHAG00000009934
I
0.769
ENSPANG00000021154
Papio anubis
ENSPANG00000021154
I
0.769
ENSOPRG00000009136
Ochotona princeps
ENSOPRG00000009136
I
0.769
ZNF143
Ochotona princeps
ENSOPRG00000005466
I
0.769
ZNF143
Anolis carolinensis
ENSACAG00000009338
I
0.769
ENSSTOG00000000256
Ictidomys tridecemlineatus
ENSSTOG00000000256
I
0.769
ZNF76
Sus scrofa
ENSSSCG00000001537
I
0.769
ZNF143
Sorex araneus
ENSSARG00000007780
I
0.769
Zfp143
Rattus norvegicus
ENSRNOG00000010087
I
0.769
ENSTGUG00000008153
Taeniopygia guttata
ENSTGUG00000008153
I
0.769
ENSPSIG00000009683
Pelodiscus sinensis
ENSPSIG00000009683
I
0.769
ENSPPYG00000016525
Pongo abelii
ENSPPYG00000016525
I
0.769
ENSPPYG00000003495
Pongo abelii
ENSPPYG00000003495
I
0.769
ZNF143
Pan troglodytes
ENSPTRG00000003349
I
0.769
Zfp523
Rattus norvegicus
ENSRNOG00000000501
I
0.769
ZNF76
Pteropus vampyrus
ENSPVAG00000008041
I
0.769
ZNF76
Pan troglodytes
ENSPTRG00000018080
I
0.769
ENSPSIG00000005652
Pelodiscus sinensis
ENSPSIG00000005652
I
0.769
ZNF76
Tursiops truncatus
ENSTTRG00000009380
I
0.769
Myotis_brandtii_ZNF76_10017771
Myotis brandtii
Myotis_brandtii_ZNF76_10017771
I
0.769
Gfo_R011843
Geospiza fortis
Gfo_R011843
I
0.769
ENSP00000379847
Macaca fascicularis
ENSP00000379847
I
0.769
ENSP00000363064
Macaca fascicularis
ENSP00000363064
I
0.769
Pvit_03784
Pogona vitticeps
Pvit_03784
I
0.769
Tal_R001092
Tyto alba
Tal_R001092
I
0.769
znf143.S
Xenopus laevis
XB-GENE-1012509
I
0.769
znf143
Xenopus tropicalis
XB-GENE-1012504
I
0.769
AAH73068
Xenopus laevis
AAH73068
I
0.769
Tal_R002540
Tyto alba
Tal_R002540
I
0.769
ENSBTAP00000008112-D1
Bos grunniens
ENSBTAP00000008112-D1
I
0.769
Cmyd_10011173
Chelonia mydas
Cmyd_10011173
I
0.769
Aan_R006576
Calypte anna
Aan_R006576
I
0.769
ZNF143
Otolemur garnettii
ENSOGAG00000011518
I
0.769
ENSTSYG00000004324
Tarsius syrichta
ENSTSYG00000004324
I
0.769
znf143
Takifugu rubripes
ENSTRUG00000009324
I
0.769
Afo_R002092
Aptenodytes forsteri
Afo_R002092
I
0.769
Afo_R014591
Aptenodytes forsteri
Afo_R014591
I
0.769
Brh_R005520
Buceros rhinoceros
Brh_R005520
I
0.769
Alligator_sinensis_CCG020455.1
Alligator sinensis
Alligator_sinensis_CCG020455.1
I
0.769
Alligator_sinensis_CCG018668.1
Alligator sinensis
Alligator_sinensis_CCG018668.1
I
0.769
znf143b
Tetraodon nigroviridis
ENSTNIG00000013739
I
0.769
ENSONIG00000015524
Oreochromis niloticus
ENSONIG00000015524
I
0.769
ZNF76
Otolemur garnettii
ENSOGAG00000002935
I
0.769
ZNF143
Callithrix jacchus
ENSCJAG00000011327
I
0.769
ZNF76
Homo sapiens
ENSG00000065029
D
0.769
ZNF76
Felis catus
ENSFCAG00000005893
I
0.769
ZNF143
Homo sapiens
ENSG00000166478
D
0.769
ZNF76
Choloepus hoffmanni
ENSCHOG00000003197
I
0.769
ZNF143
Canis familiaris
ENSCAFG00000007373
I
0.769
ZNF76
Gorilla gorilla
ENSGGOG00000014188
I
0.769
ZNF143
Gallus gallus
ENSGALG00000005787
I
0.769
ZNF143
Felis catus
ENSFCAG00000002342
I
0.769
ENSFALG00000000985
Ficedula albicollis
ENSFALG00000000985
I
0.769
ENSCSAG00000009955
Chlorocebus sabaeus
ENSCSAG00000009955
I
0.769
ZNF76
Callithrix jacchus
ENSCJAG00000015519
I
0.769
ZNF76
Cavia porcellus
ENSCPOG00000007381
I
0.769
ZNF143
Cavia porcellus
ENSCPOG00000003109
I
0.769
znf143b
Danio rerio
ENSDARG00000041581
I
0.769
ZNF76
Dasypus novemcinctus
ENSDNOG00000015856
I
0.769
ZNF143
Erinaceus europaeus
ENSEEUG00000000955
I
0.769
ZNF143
Equus caballus
ENSECAG00000018889
I
0.769
ZNF76
Equus caballus
ENSECAG00000014843
I
0.769
ZNF76
Canis familiaris
ENSCAFG00000001304
I
0.769
ZNF76
Bos taurus
ENSBTAG00000006170
I
0.769
Zfp523
Mus musculus
ENSMUSG00000024220
I
0.769
ENSMPUG00000012796
Mustela putorius furo
ENSMPUG00000012796
I
0.769
ENSMPUG00000003522
Mustela putorius furo
ENSMPUG00000003522
I
0.769
Zfp143
Mus musculus
ENSMUSG00000061079
D
0.769
ENSAMEG00000003872
Ailuropoda melanoleuca
ENSAMEG00000003872
I
0.769
ZNF76
Oryctolagus cuniculus
ENSOCUG00000015630
I
0.769
ZNF143
Oryctolagus cuniculus
ENSOCUG00000005226
I
0.769
ENSAMEG00000000752
Ailuropoda melanoleuca
ENSAMEG00000000752
I
0.769
ZNF76
Macaca mulatta
ENSMMUG00000023559
I
0.769
ZNF76
Monodelphis domestica
ENSMODG00000013806
I
0.769
ENSMEUG00000003014
Macropus eugenii
ENSMEUG00000003014
I
0.769
ZNF76
Loxodonta africana
ENSLAFG00000026071
I
0.769
ZNF143
Loxodonta africana
ENSLAFG00000004487
I
0.769
ZNF143
Meleagris gallopavo
ENSMGAG00000006206
I
0.769
ZNF143
Microcebus murinus
ENSMICG00000004353
I
0.769
ZNF76
Myotis lucifugus
ENSMLUG00000008610
I
0.769
ZNF143
Macaca mulatta
ENSMMUG00000008758
I
0.769
ENSAPLG00000002385
Anas platyrhynchos
ENSAPLG00000002385
I
0.769
ENSAMXG00000008869
Astyanax mexicanus
ENSAMXG00000008869
I
0.768
Ogr18895
Ophisaurus gracilis
Ogr18895
I
0.767
ENSAMXG00000003833
Astyanax mexicanus
ENSAMXG00000003833
I
0.767
Myotis_brandtii_ZNF143_10021171
Myotis brandtii
Myotis_brandtii_ZNF143_10021171
I
0.767
ZNF143
Tursiops truncatus
ENSTTRG00000015353
I
0.767
ZNF143
Myotis lucifugus
ENSMLUG00000000213
I
0.767
ENSPFOG00000008911
Poecilia formosa
ENSPFOG00000008911
I
0.767
ENSOARG00000012477
Ovis aries
ENSOARG00000012477
I
0.767
ENSGMOG00000001888
Gadus morhua
ENSGMOG00000001888
I
0.767
ENSLACG00000017669
Latimeria chalumnae
ENSLACG00000017669
I
0.767
ENSP00000379847-D1
Bos grunniens
ENSP00000379847-D1
I
0.767
ENSXMAG00000005152
Xiphophorus maculatus
ENSXMAG00000005152
I
0.767
znf143b
Gasterosteus aculeatus
ENSGACG00000009776
I
0.767
ZNF143
Ornithorhynchus anatinus
ENSOANG00000005853
I
0.766
estExt_fgenesh2_pg.C_1970081
Branchiostoma floridae
estExt_fgenesh2_pg.C_1970081
I
0.764
ENSCSAG00000004520
Chlorocebus sabaeus
ENSCSAG00000004520
I
0.763
znf143b
Oryzias latipes
ENSORLG00000001130
I
0.762
ENSSTOG00000009647
Ictidomys tridecemlineatus
ENSSTOG00000009647
I
0.762