CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pag1_scaffold_198-snap-gene-0.19
(
Pythium aphanidermatum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
maker-pag1_scaffold_198-snap-gene-0.19
T122525_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPA00000018392
C2H2 ZF
349
371
HECPTCQKQFRGRSELQNHLRTH
EPrPA00000018392
C2H2 ZF
377
401
LKCSYAGCSKRYAHSSNLRAHERTH
EPrPA00000018392
C2H2 ZF
407
431
YACHYDGCGKSFAHSVSLKEHIWMH
EPrPA00000018392
C2H2 ZF
437
460
YVCPYEGCEKKFTQVSNFARHKKD
Links
Other
C2H2 ZF
family TFs
Other
Pythium aphanidermatum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phyra78502
Phytophthora ramorum
Phyra78502
N
0.822
maker-par_contig_1574-fgenesh-gene-0.1
Pythium arrhenomanes
maker-par_contig_1574-fgenesh-gene-0.1
N
0.822
maker-pve_contig_65-fgenesh-gene-0.18
Pythium vexans
maker-pve_contig_65-fgenesh-gene-0.18
N
0.822
fgenesh_scip_prom.28083.3966
Phytophthora lateralis
fgenesh_scip_prom.28083.3966
N
0.820
fgenesh_scip_prom.46568.5520
Phytophthora kernoviae
fgenesh_scip_prom.46568.5520
N
0.819
Physo127993
Phytophthora sojae
Physo127993
N
0.810
estExt_fgenesh1_kg.C_2620004
Phytophthora capsici
estExt_fgenesh1_kg.C_2620004
N
0.810
HpaG806957
Hyaloperonospora arabidopsidis
HpaG806957
N
0.810
F443_04902
Phytophthora parasitica
F443_04902
N
0.810
PITG_19177
Phytophthora infestans
PITG_19177
N
0.798
ALNC14_027820
Albugo laibachii
ALNC14_027820
N
0.796
PYU1_G011596
Pythium ultimum
PYU1_G011596
N
0.796
maker-pir_contig_91-fgenesh-gene-0.1
Pythium irregulare
maker-pir_contig_91-fgenesh-gene-0.1
N
0.793
maker-piw_contig_312-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_312-fgenesh-gene-0.2
N
0.793
SPRG_08759
Saprolegnia parasitica
SPRG_08759
N
0.767