maker-pir_contig_54-snap-gene-0.26 (Pythium irregulare)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 maker-pir_contig_54-snap-gene-0.26 T122574_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Phyra42912
M01181_2.00 		Phytophthora ramorum
RCSCATCHYN
NRDGATGSGY		 PBM
Lambert et al.(2019)
pTH11167 		0.824 0.971
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EPrPI00000014626 C2H2 ZF 88 112
EPrPI00000014626 C2H2 ZF 118 142
EPrPI00000014626 C2H2 ZF 148 172

Links

Other C2H2 ZF family TFs
Other Pythium irregulare TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Phyra42912 Phytophthora ramorum Phyra42912 D 0.824
maker-pag1_scaffold_440-fgenesh-gene-0.3 Pythium aphanidermatum maker-pag1_scaffold_440-fgenesh-gene-0.3 I 0.816
PITG_10815 Phytophthora infestans PITG_10815 I 0.804
fgenesh1_pg.C_scaffold_2000429 Phytophthora capsici fgenesh1_pg.C_scaffold_2000429 I 0.804
gw1.8.393.1 Phytophthora capsici gw1.8.393.1 I 0.804
F443_10717 Phytophthora parasitica F443_10717 I 0.804
maker-pve_contig_642-snap-gene-0.15 Pythium vexans maker-pve_contig_642-snap-gene-0.15 I 0.804
HpaG802957 Hyaloperonospora arabidopsidis HpaG802957 I 0.804
fgenesh_scip_prom.46568.8091 Phytophthora kernoviae fgenesh_scip_prom.46568.8091 I 0.788
ALNC14_012910 Albugo laibachii ALNC14_012910 I 0.781