MCINX009924 (Melitaea cinxia)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 MCINX009924 T122969_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
scrt
M03673_2.00
Drosophila melanogaster
RHGCAACAGGTGK

MCACCTGTTGCDY
SELEX
Nitta et al.(2015)
scrt_1
0.756 0.851
scrt
M06085_2.00
Drosophila melanogaster
MCCACCTGTTG

CAACAGGTGGK
B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880
0.756 0.851
scrt
M06086_2.00
Drosophila melanogaster
DNKCAACAGGTGK

MCACCTGTTGMNH
B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880
0.756 0.851
scrt
M06087_2.00
Drosophila melanogaster
VMCACCTGTTGMN

NKCAACAGGTGKB
B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880
0.756 0.851
SCRT1
M02929_2.00
Homo sapiens
RHKCAACAGGTGKNH

DNMCACCTGTTGMDY
SELEX
Jolma et al.(2013)
SCRT1_1
0.756 0.763
SCRT1
M04655_2.00
Homo sapiens
NKCAACAGGTD

HACCTGTTGMN
SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX
0.756 0.763
SCRT1
M08397_2.00
Homo sapiens
RWKCAACAGGTG

CACCTGTTGMWY
ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE
0.756 0.763
SCRT1
M04656_2.00
Homo sapiens
NGCRACAGGTD

HACCTGTYGCN
SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX
0.756 0.763
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MCINX009924-PA C2H2 ZF 204 226
MCINX009924-PA C2H2 ZF 235 257
MCINX009924-PA C2H2 ZF 261 283
MCINX009924-PA C2H2 ZF 289 313
MCINX009924-PA C2H2 ZF 319 340

Links

Other C2H2 ZF family TFs
Other Melitaea cinxia TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
KGM_21491 Danaus plexippus KGM_21491 N 0.799
BGIBMGA000604 Bombyx mori BGIBMGA000604 I 0.783
BGIBMGA000607 Bombyx mori BGIBMGA000607 I 0.775
KGM_21493 Danaus plexippus KGM_21493 I 0.775
MCINX009925 Melitaea cinxia MCINX009925 I 0.775
HMEL014701 Heliconius melpomene HMEL014701 I 0.775
LCUP005780 Lucilia cuprina LCUP005780 I 0.756
Cflo_09305--XP_001121064.1_APIME Camponotus floridanus Cflo_09305--XP_001121064.1_APIME I 0.756
GK17507 Drosophila willistoni FBgn0219506 I 0.756
GM14603 Drosophila sechellia FBgn0169524 I 0.756
GM11368 Drosophila sechellia FBgn0166311 I 0.756
GD13794 Drosophila simulans FBgn0185494 I 0.756
GJ16103 Drosophila virilis FBgn0203288 I 0.756
AATE010651 Anopheles atroparvus AATE010651 I 0.756
GE21392 Drosophila yakuba FBgn0238652 I 0.756
ACUA003488 Anopheles culicifacies ACUA003488 I 0.756
ASTEI08595 Anopheles stephensi ASTEI08595 I 0.756
ASIS012063 Anopheles sinensis ASIS012063 I 0.756
LLOJ003272 Lutzomyia longipalpis LLOJ003272 I 0.756
MDOA005810 Musca domestica MDOA005810 I 0.756
PPAI000594 Phlebotomus papatasi PPAI000594 I 0.756
AMEM017035 Anopheles merus AMEM017035 I 0.756
AMEC015586 Anopheles melas AMEC015586 I 0.756
GI12551 Drosophila mojavensis FBgn0135308 I 0.756
ACUA020861 Anopheles culicifacies ACUA020861 I 0.756
AFAF017001 Anopheles farauti AFAF017001 I 0.756
AFUN001835 Anopheles funestus AFUN001835 I 0.756
ACOM031677 Anopheles coluzzii ACOM031677 I 0.756
GG15174 Drosophila erecta FBgn0107427 I 0.756
ENSCPOG00000024058 Cavia porcellus ENSCPOG00000024058 I 0.756
SCRT1 Callithrix jacchus ENSCJAG00000021406 I 0.756
ENSCSAG00000008549 Chlorocebus sabaeus ENSCSAG00000008549 I 0.756
SCRT1 Dasypus novemcinctus ENSDNOG00000043826 I 0.756
SCRT1 Homo sapiens ENSG00000261678 D 0.756
SCRT1 Bos taurus ENSBTAG00000046208 I 0.756
ENSAMEG00000005557 Ailuropoda melanoleuca ENSAMEG00000005557 I 0.756
AAEL014359 Aedes aegypti AAEL014359 I 0.756
AAEL009230 Aedes aegypti AAEL009230 I 0.756
ACYPI004643 Acyrthosiphon pisum ACYPI004643 I 0.756
AGAP006794 Anopheles gambiae AGAP006794 I 0.756
CPIJ004535 Culex quinquefasciatus CPIJ004535 I 0.756
SCRT1 Gorilla gorilla ENSGGOG00000013612 I 0.756
SCRT1 Loxodonta africana ENSLAFG00000031587 I 0.756
ENSSTOG00000023184 Ictidomys tridecemlineatus ENSSTOG00000023184 I 0.756
SCRT1 Sus scrofa ENSSSCG00000025879 I 0.756
scrt Drosophila melanogaster FBgn0004880 D 0.756
GF25020 Drosophila ananassae FBgn0102012 I 0.756
CpipJ_CPIJ004535 Culex pipiens CpipJ_CPIJ004535 I 0.756
Scrt1 Rattus norvegicus ENSRNOG00000025594 I 0.756
ENSPANG00000017232 Papio anubis ENSPANG00000017232 I 0.756
SCRT1 Macaca mulatta ENSMMUG00000028886 I 0.756
Scrt1 Mus musculus ENSMUSG00000048385 I 0.756
ENSOARG00000014008 Ovis aries ENSOARG00000014008 I 0.756
SCRT1 Otolemur garnettii ENSOGAG00000026538 I 0.756
GH15771 Drosophila grimshawi FBgn0123242 I 0.756