MLOC_51405 (Hordeum vulgare)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 MLOC_51405 T123593_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AZF2
M01854_2.00
Arabidopsis thaliana
NASTRNN

NNYASTN
PBM
Weirauch et al.(2014)
pTH8258
0.782 0.826
ZAT1
M01167_2.00
Arabidopsis thaliana
NHRCTNN

NNAGYDN
PBM
Lambert et al.(2019)
pTH10246
0.770 0.674
ZAT4
M01168_2.00
Arabidopsis thaliana
NNHRSTN

NASYDNN
PBM
Lambert et al.(2019)
pTH11142
0.769 0.674
ZAT9
M06817_2.00
Arabidopsis thaliana
YTACTWHH

DDWAGTAR
Dap-seq
OMalley et al.(2016)
At3g60580_col_a
0.769 0.674
ZAT6
M00861_2.00
Arabidopsis thaliana
NNHRSTN

NASYDNN
PBM
Franco-Zorrilla et al.(2014)
ZAT6
0.764 0.783
ZAT10
M01852_2.00
Arabidopsis thaliana
NNHASWN

NWSTDNN
PBM
Weirauch et al.(2014)
pTH7255
0.757 0.761
ZAT10
M06799_2.00
Arabidopsis thaliana
WSHHCACT

AGTGDDSW
Dap-seq
OMalley et al.(2016)
STZ_colamp_a
0.757 0.761
ZAT10
M06800_2.00
Arabidopsis thaliana
YWSHNHCASTN

NASTGDNDSWR
Dap-seq
OMalley et al.(2016)
STZ_col
0.757 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_51405.1 C2H2 ZF 77 99
MLOC_51405.1 C2H2 ZF 135 157
MLOC_51405.2 C2H2 ZF 77 99

Links

Other C2H2 ZF family TFs
Other Hordeum vulgare TFs

251 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_12743 Aegilops tauschii F775_12743 N 0.763
AMTR_s00137p00104280 Amborella trichopoda AMTR_s00137p00104280 I 0.763
C2H2 Arabidopsis lyrata scaffold_600374.1 I 0.764
AZF3 Arabidopsis lyrata scaffold_800768.1 I 0.765
scaffold_503291.1 Arabidopsis lyrata scaffold_503291.1 I 0.769
fgenesh1_pm.C_scaffold_1003183 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1003183 I 0.767
STZ Arabidopsis lyrata fgenesh2_kg.1__2932__AT1G27730.1 I 0.757
AZF2 Arabidopsis lyrata fgenesh2_kg.3__2173__AT3G19580.2 I 0.788
fgenesh2_kg.4__2705__AT2G45120.1 Arabidopsis lyrata fgenesh2_kg.4__2705__AT2G45120.1 I 0.769
ZAT6 Arabidopsis thaliana AT5G04340 D 0.764
AZF3 Arabidopsis thaliana AT5G43170 I 0.765
ZAT9 Arabidopsis thaliana AT3G60580 D 0.769
AZF2 Arabidopsis thaliana AT3G19580 D 0.782
ZAT4 Arabidopsis thaliana AT2G45120 D 0.769
ZAT10 Arabidopsis thaliana AT1G27730 D 0.757
ZAT1 Arabidopsis thaliana AT1G02030 D 0.770
Bostr.2128s0015 Boechera stricta Bostr.2128s0015 I 0.764
Bostr.25993s0262 Boechera stricta Bostr.25993s0262 I 0.769
Bostr.13158s0058 Boechera stricta Bostr.13158s0058 I 0.769
Bostr.15697s0099 Boechera stricta Bostr.15697s0099 I 0.762
Bostr.5325s0123 Boechera stricta Bostr.5325s0123 I 0.770
Bostr.3148s0159 Boechera stricta Bostr.3148s0159 I 0.764
Bostr.26675s0176 Boechera stricta Bostr.26675s0176 I 0.772
Bostr.19424s0704 Boechera stricta Bostr.19424s0704 I 0.788
BRADI2G49250 Brachypodium distachyon BRADI2G49250 N 0.763
BRADI4G03410 Brachypodium distachyon BRADI4G03410 I 0.786
BRADI4G03340 Brachypodium distachyon BRADI4G03340 I 0.774
BRADI3G33100 Brachypodium distachyon BRADI3G33100 I 0.775
BRADI1G16010 Brachypodium distachyon BRADI1G16010 I 0.766
BRADI1G14750 Brachypodium distachyon BRADI1G14750 I 0.794
Bo5g113850 Brassica oleracea Bo5g113850 I 0.788
Bo9g181170 Brassica oleracea Bo9g181170 I 0.764
Bo7g048650 Brassica oleracea Bo7g048650 I 0.762
Bo6g077190 Brassica oleracea Bo6g077190 I 0.769
Bo5g052290 Brassica oleracea Bo5g052290 I 0.762
Bo3g142840 Brassica oleracea Bo3g142840 I 0.757
Bo1g113530 Brassica oleracea Bo1g113530 I 0.788
Bo4g104940 Brassica oleracea Bo4g104940 I 0.769
Bo8g095300 Brassica oleracea Bo8g095300 I 0.769
Bo7g065200 Brassica oleracea Bo7g065200 I 0.758
Bra032845 Brassica rapa Bra032845 I 0.762
Bra022436 Brassica rapa Bra022436 I 0.788
Bra003422 Brassica rapa Bra003422 I 0.769
Bra033666 Brassica rapa Bra033666 I 0.758
Bra038219 Brassica rapa Bra038219 I 0.788
Bra014483 Brassica rapa Bra014483 I 0.769
Bra010922 Brassica rapa Bra010922 I 0.757
Bra018817 Brassica rapa Bra018817 I 0.767
Bra009464 Brassica rapa Bra009464 I 0.764
Bra007545 Brassica rapa Bra007545 I 0.769
PK10188.1 Cannabis sativa PK10188.1 I 0.788
Cagra.9217s0012 Capsella grandiflora Cagra.9217s0012 I 0.758
Cagra.6943s0031 Capsella grandiflora Cagra.6943s0031 I 0.788
Cagra.6011s0004 Capsella grandiflora Cagra.6011s0004 I 0.769
Cagra.0239s0063 Capsella grandiflora Cagra.0239s0063 I 0.769
Carubv10014391m.g Capsella rubella Carubv10014391m.g I 0.788
Carubv10017660m.g Capsella rubella Carubv10017660m.g I 0.769
Carubv10023569m.g Capsella rubella Carubv10023569m.g I 0.769
Carubv10001868m.g Capsella rubella Carubv10001868m.g I 0.758
evm.TU.supercontig_249.7 Carica papaya evm.TU.supercontig_249.7 I 0.811
evm.TU.supercontig_2070.1 Carica papaya evm.TU.supercontig_2070.1 I 0.775
Ca_23672 Cicer arietinum Ca_23672 I 0.775
Ca_18364 Cicer arietinum Ca_18364 I 0.788
Ca_01586 Cicer arietinum Ca_01586 I 0.788
Ca_05641 Cicer arietinum Ca_05641 I 0.806
Ciclev10032899m.g Citrus clementina Ciclev10032899m.g I 0.759
Ciclev10032889m.g Citrus clementina Ciclev10032889m.g I 0.759
Ciclev10029065m.g Citrus clementina Ciclev10029065m.g I 0.788
Ciclev10032922m.g Citrus clementina Ciclev10032922m.g I 0.759
Ciclev10020499m.g Citrus clementina Ciclev10020499m.g I 0.775
Ciclev10002297m.g Citrus clementina Ciclev10002297m.g I 0.788
orange1.1g044606m.g Citrus sinensis orange1.1g044606m.g I 0.775
orange1.1g024499m.g Citrus sinensis orange1.1g024499m.g I 0.788
orange1.1g040287m.g Citrus sinensis orange1.1g040287m.g I 0.759
orange1.1g038669m.g Citrus sinensis orange1.1g038669m.g I 0.788
orange1.1g041414m.g Citrus sinensis orange1.1g041414m.g I 0.759
orange1.1g044181m.g Citrus sinensis orange1.1g044181m.g I 0.759
Cucsa.352740 Cucumis sativus Cucsa.352740 I 0.764
Cucsa.219210 Cucumis sativus Cucsa.219210 I 0.768
Eucgr.D02497 Eucalyptus grandis Eucgr.D02497 I 0.792
Eucgr.F02262 Eucalyptus grandis Eucgr.F02262 I 0.806
Eucgr.K00165 Eucalyptus grandis Eucgr.K00165 I 0.784
Eucgr.G01247 Eucalyptus grandis Eucgr.G01247 I 0.788
Thhalv10006508m.g Eutrema salsugineum Thhalv10006508m.g I 0.769
Thhalv10014546m.g Eutrema salsugineum Thhalv10014546m.g I 0.764
Thhalv10021307m.g Eutrema salsugineum Thhalv10021307m.g I 0.788
Thhalv10009894m.g Eutrema salsugineum Thhalv10009894m.g I 0.756
gene02558-v1.0-hybrid Fragaria vesca gene02558-v1.0-hybrid I 0.788
GLYMA14G09760 Glycine max GLYMA14G09760 I 0.788
GLYMA06G04840 Glycine max GLYMA06G04840 I 0.788
GLYMA10G40400 Glycine max GLYMA10G40400 I 0.806
GLYMA04G04760 Glycine max GLYMA04G04760 I 0.788
GLYMA03G03950 Glycine max GLYMA03G03950 I 0.775
GLYMA01G32981 Glycine max GLYMA01G32981 I 0.775
GLYMA01G18606 Glycine max GLYMA01G18606 I 0.775
GLYMA17G35430 Glycine max GLYMA17G35430 I 0.788
Gorai.004G164000 Gossypium raimondii Gorai.004G164000 I 0.776
Gorai.005G232300 Gossypium raimondii Gorai.005G232300 I 0.764
Gorai.001G175400 Gossypium raimondii Gorai.001G175400 I 0.775
Gorai.002G132600 Gossypium raimondii Gorai.002G132600 I 0.797
Gorai.008G020700 Gossypium raimondii Gorai.008G020700 I 0.788
Gorai.008G106500 Gossypium raimondii Gorai.008G106500 I 0.798
Gorai.010G025200 Gossypium raimondii Gorai.010G025200 I 0.797
Gorai.013G050100 Gossypium raimondii Gorai.013G050100 I 0.788
MLOC_54674 Hordeum vulgare MLOC_54674 I 0.788
LPERR07G17940 Leersia perrieri LPERR07G17940 N 0.766
LPERR03G21480 Leersia perrieri LPERR03G21480 I 0.808
LPERR03G19190 Leersia perrieri LPERR03G19190 N 0.763
Lus10009278.g Linum usitatissimum Lus10009278.g I 0.769
Lus10038929.g Linum usitatissimum Lus10038929.g N 0.764
Lus10015888.g Linum usitatissimum Lus10015888.g I 0.759
chr1.LjT45O14.140.nd Lotus japonicus chr1.LjT45O14.140.nd I 0.764
chr1.CM0050.50.nc Lotus japonicus chr1.CM0050.50.nc I 0.764
chr5.CM0096.480.nc Lotus japonicus chr5.CM0096.480.nc I 0.788
chr5.CM0200.550.nc Lotus japonicus chr5.CM0200.550.nc I 0.788
MDP0000319225 Malus domestica MDP0000319225 I 0.788
MDP0000573176 Malus domestica MDP0000573176 I 0.788
MDP0000762756 Malus domestica MDP0000762756 I 0.788
MDP0000198015 Malus domestica MDP0000198015 I 0.788
cassava19892.m1 Manihot esculenta cassava19892.m1 I 0.793
cassava12475.valid.m1 Manihot esculenta cassava12475.valid.m1 I 0.791
cassava43667.valid.m1 Manihot esculenta cassava43667.valid.m1 I 0.792
cassava39064.m1 Manihot esculenta cassava39064.m1 I 0.759
cassava35732.valid.m1 Manihot esculenta cassava35732.valid.m1 I 0.788
cassava32957.m1 Manihot esculenta cassava32957.m1 I 0.764
cassava14164.m1 Manihot esculenta cassava14164.m1 I 0.793
MTR_0160s0030 Medicago truncatula MTR_0160s0030 I 0.775
MTR_1g018420 Medicago truncatula MTR_1g018420 I 0.787
MTR_1g106730 Medicago truncatula MTR_1g106730 I 0.788
MTR_3g102980 Medicago truncatula MTR_3g102980 I 0.788
MTR_4g027440 Medicago truncatula MTR_4g027440 I 0.769
mgf021094m Mimulus guttatus mgf021094m I 0.792
mgf017082m Mimulus guttatus mgf017082m I 0.793
mgf021789m Mimulus guttatus mgf021789m I 0.780
mgf006006m Mimulus guttatus mgf006006m I 0.781
GSMUA_Achr4G26920_001 Musa acuminata GSMUA_Achr4G26920_001 I 0.769
GSMUA_Achr5G28550_001 Musa acuminata GSMUA_Achr5G28550_001 I 0.759
GSMUA_Achr5G15450_001 Musa acuminata GSMUA_Achr5G15450_001 I 0.759
GSMUA_Achr5G08730_001 Musa acuminata GSMUA_Achr5G08730_001 I 0.784
GSMUA_Achr2G13410_001 Musa acuminata GSMUA_Achr2G13410_001 I 0.768
GSMUA_Achr1G01550_001 Musa acuminata GSMUA_Achr1G01550_001 I 0.769
GSMUA_Achr11G24480_001 Musa acuminata GSMUA_Achr11G24480_001 I 0.759
GSMUA_Achr11G21040_001 Musa acuminata GSMUA_Achr11G21040_001 I 0.769
OBART03G22570 Oryza barthii OBART03G22570 I 0.766
OBART04G21020 Oryza barthii OBART04G21020 I 0.769
OBART07G20660 Oryza barthii OBART07G20660 N 0.776
OBART03G22560 Oryza barthii OBART03G22560 N 0.763
OBART02G26700 Oryza barthii OBART02G26700 I 0.759
OB04G28040 Oryza brachyantha OB04G28040 I 0.769
OB03G31790 Oryza brachyantha OB03G31790 N 0.763
OB03G31780 Oryza brachyantha OB03G31780 I 0.766
ORGLA04G0180800 Oryza glaberrima ORGLA04G0180800 I 0.769
ORGLA07G0158200 Oryza glaberrima ORGLA07G0158200 N 0.776
ORGLA03G0210300 Oryza glaberrima ORGLA03G0210300 I 0.766
ORGLA03G0210200 Oryza glaberrima ORGLA03G0210200 N 0.763
ORGLA02G0229600 Oryza glaberrima ORGLA02G0229600 I 0.759
OGLUM07G20440 Oryza glumaepatula OGLUM07G20440 N 0.776
OGLUM03G23350 Oryza glumaepatula OGLUM03G23350 I 0.766
OGLUM03G23340 Oryza glumaepatula OGLUM03G23340 N 0.763
OGLUM02G27190 Oryza glumaepatula OGLUM02G27190 I 0.759
BGIOSGA010469 Oryza indica BGIOSGA010469 N 0.763
BGIOSGA010470 Oryza indica BGIOSGA010470 N 0.763
BGIOSGA016894 Oryza indica BGIOSGA016894 I 0.769
BGIOSGA008755 Oryza indica BGIOSGA008755 I 0.759
BGIOSGA010468 Oryza indica BGIOSGA010468 I 0.766
OLONG_016061 Oryza longistaminata OLONG_016061 I 0.769
OLONG_027628 Oryza longistaminata OLONG_027628 I 0.766
OMERI07G17320 Oryza meridionalis OMERI07G17320 N 0.776
OMERI02G26030 Oryza meridionalis OMERI02G26030 I 0.759
OMERI04G17450 Oryza meridionalis OMERI04G17450 I 0.769
ONIVA02G29150 Oryza nivara ONIVA02G29150 I 0.759
ONIVA07G19100 Oryza nivara ONIVA07G19100 N 0.776
ONIVA04G19260 Oryza nivara ONIVA04G19260 I 0.769
OPUNC04G18700 Oryza punctata OPUNC04G18700 I 0.769
OPUNC07G19500 Oryza punctata OPUNC07G19500 N 0.776
OPUNC12G15600 Oryza punctata OPUNC12G15600 I 0.812
OPUNC03G21190 Oryza punctata OPUNC03G21190 N 0.763
ORUFI04G22610 Oryza rufipogon ORUFI04G22610 I 0.769
ORUFI03G23240 Oryza rufipogon ORUFI03G23240 I 0.766
ORUFI03G23230 Oryza rufipogon ORUFI03G23230 N 0.763
ORUFI02G28150 Oryza rufipogon ORUFI02G28150 I 0.759
ORUFI07G21520 Oryza rufipogon ORUFI07G21520 N 0.776
OS07G0590100 Oryza sativa OS07G0590100 N 0.776
OS03G0437100 Oryza sativa OS03G0437100 N 0.763
OS12G0583700 Oryza sativa OS12G0583700 I 0.812
OS02G0659500 Oryza sativa OS02G0659500 I 0.759
OS11G0340477 Oryza sativa OS11G0340477 N 0.763
OS03G0437200 Oryza sativa OS03G0437200 I 0.766
OS04G0552700 Oryza sativa OS04G0552700 I 0.769
Pavir.J15191 Panicum virgatum Pavir.J15191 I 0.776
Pavir.J12087 Panicum virgatum Pavir.J12087 N 0.778
Pavir.Ib01978 Panicum virgatum Pavir.Ib01978 N 0.778
Pavir.Ba01050 Panicum virgatum Pavir.Ba01050 I 0.776
Pavir.Ab02618 Panicum virgatum Pavir.Ab02618 I 0.769
Pavir.J37325 Panicum virgatum Pavir.J37325 N 0.778
POPTR_0002s14460 Populus trichocarpa POPTR_0002s14460 I 0.769
POPTR_0014s01760 Populus trichocarpa POPTR_0014s01760 I 0.788
POPTR_0009s09250 Populus trichocarpa POPTR_0009s09250 I 0.782
POPTR_0002s12010 Populus trichocarpa POPTR_0002s12010 I 0.787
Pm005390 Prunus mume Pm005390 I 0.788
Pm021284 Prunus mume Pm021284 I 0.788
PRUPE_ppa009924mg Prunus persica PRUPE_ppa009924mg I 0.788
PRUPE_ppa011060mg Prunus persica PRUPE_ppa011060mg I 0.788
30174.m008818 Ricinus communis 30174.m008818 I 0.793
29661.m000908 Ricinus communis 29661.m000908 I 0.788
28152.m000908 Ricinus communis 28152.m000908 I 0.792
30170.m013751 Ricinus communis 30170.m013751 I 0.781
SapurV1A.0005s0440 Salix purpurea SapurV1A.0005s0440 I 0.782
SapurV1A.0019s0280 Salix purpurea SapurV1A.0019s0280 I 0.782
SapurV1A.0033s0440 Salix purpurea SapurV1A.0033s0440 I 0.768
SapurV1A.0248s0230 Salix purpurea SapurV1A.0248s0230 I 0.769
SapurV1A.0845s0100 Salix purpurea SapurV1A.0845s0100 I 0.788
Si010615m.g Setaria italica Si010615m.g I 0.769
Si037429m.g Setaria italica Si037429m.g N 0.778
Si037343m.g Setaria italica Si037343m.g N 0.772
Si037516m.g Setaria italica Si037516m.g N 0.763
Si023013m.g Setaria italica Si023013m.g I 0.788
Si032711m.g Setaria italica Si032711m.g I 0.776
Solyc01g090840.2 Solanum lycopersicum Solyc01g090840.2 I 0.775
Solyc01g107170.2 Solanum lycopersicum Solyc01g107170.2 I 0.791
Solyc12g088390.1 Solanum lycopersicum Solyc12g088390.1 I 0.790
Solyc03g115450.1 Solanum lycopersicum Solyc03g115450.1 I 0.770
PGSC0003DMG400026020 Solanum tuberosum PGSC0003DMG400026020 I 0.775
PGSC0003DMG400024550 Solanum tuberosum PGSC0003DMG400024550 I 0.770
PGSC0003DMG400011548 Solanum tuberosum PGSC0003DMG400011548 I 0.797
PGSC0003DMG400034322 Solanum tuberosum PGSC0003DMG400034322 I 0.773
PGSC0003DMG400041467 Solanum tuberosum PGSC0003DMG400041467 I 0.792
PGSC0003DMG400028275 Solanum tuberosum PGSC0003DMG400028275 I 0.766
PGSC0003DMG400002383 Solanum tuberosum PGSC0003DMG400002383 I 0.782
PGSC0003DMG400020929 Solanum tuberosum PGSC0003DMG400020929 I 0.779
Sb02g038070 Sorghum bicolor Sb02g038070 I 0.776
Sb01g031920 Sorghum bicolor Sb01g031920 N 0.758
Sb01g031890 Sorghum bicolor Sb01g031890 N 0.778
Sb01g031900 Sorghum bicolor Sb01g031900 N 0.778
TCM_034720 Theobroma cacao TCM_034720 I 0.788
TCM_000780 Theobroma cacao TCM_000780 I 0.757
TCM_007214 Theobroma cacao TCM_007214 I 0.788
Traes_4BS_FE945D2FC Triticum aestivum Traes_4BS_FE945D2FC I 0.818
Traes_2DS_11ADF414D Triticum aestivum Traes_2DS_11ADF414D N 0.763
Traes_2BS_494F02775 Triticum aestivum Traes_2BS_494F02775 N 0.763
TRIUR3_29692 Triticum urartu TRIUR3_29692 I 0.769
VIT_18s0001g09230 Vitis vinifera VIT_18s0001g09230 I 0.788
VIT_15s0021g02720 Vitis vinifera VIT_15s0021g02720 I 0.775
VIT_07s0129g00240 Vitis vinifera VIT_07s0129g00240 I 0.786
VIT_03s0091g00690 Vitis vinifera VIT_03s0091g00690 I 0.781
GRMZM2G069176 Zea mays GRMZM2G069176 N 0.778
GRMZM2G106026 Zea mays GRMZM2G106026 N 0.774
GRMZM2G113860 Zea mays GRMZM2G113860 N 0.778
GRMZM2G170520 Zea mays GRMZM2G170520 I 0.769
AC185108.3_FG011 Zea mays AC185108.3_FG011 I 0.776
GRMZM5G883760 Zea mays GRMZM5G883760 N 0.763