MTR_7g063220 (Medicago truncatula)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 MTR_7g063220 T123809_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBE
M01858_2.00 		Arabidopsis thaliana
NNNASWN
NWSTNNN		 PBM
Weirauch et al.(2014)
pTH7538 		0.794 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH22971 C2H2 ZF 26 48

Links

Other C2H2 ZF family TFs
Other Medicago truncatula TFs

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr1.CM0147.870.nc Lotus japonicus chr1.CM0147.870.nc I 0.827
GLYMA07G16290 Glycine max GLYMA07G16290 I 0.817
cassava14614.m1 Manihot esculenta cassava14614.m1 I 0.794
OBART05G10090 Oryza barthii OBART05G10090 I 0.794
e_gw1.1.457.1 Physcomitrella patens e_gw1.1.457.1 I 0.794
OB05G18710 Oryza brachyantha OB05G18710 I 0.794
MTR_1g070265 Medicago truncatula MTR_1g070265 I 0.794
Bostr.13129s0367 Boechera stricta Bostr.13129s0367 I 0.794
MLOC_76482 Hordeum vulgare MLOC_76482 I 0.794
e_gw1.6.268.1 Physcomitrella patens e_gw1.6.268.1 I 0.794
OGLUM05G10360 Oryza glumaepatula OGLUM05G10360 I 0.794
Traes_1BL_4026DC5011 Triticum aestivum Traes_1BL_4026DC5011 I 0.794
OPUNC05G08760 Oryza punctata OPUNC05G08760 I 0.794
ORGLA05G0088100 Oryza glaberrima ORGLA05G0088100 I 0.794
ORUFI05G10920 Oryza rufipogon ORUFI05G10920 I 0.794
OS05G0286100 Oryza sativa OS05G0286100 I 0.794
TCM_021875 Theobroma cacao TCM_021875 I 0.794
Traes_1AL_80D0BD0DC Triticum aestivum Traes_1AL_80D0BD0DC I 0.794
GSMUA_Achr7G26850_001 Musa acuminata GSMUA_Achr7G26850_001 I 0.794
OLONG_023754 Oryza longistaminata OLONG_023754 I 0.794
ONIVA06G26970 Oryza nivara ONIVA06G26970 I 0.794
TRIUR3_04794 Triticum urartu TRIUR3_04794 I 0.794
LPERR05G08090 Leersia perrieri LPERR05G08090 I 0.794
GLYMA11G34285 Glycine max GLYMA11G34285 I 0.794
Thhalv10015420m.g Eutrema salsugineum Thhalv10015420m.g I 0.794
Bo9g176590 Brassica oleracea Bo9g176590 I 0.794
Bra009160 Brassica rapa Bra009160 I 0.794
RBE Arabidopsis lyrata fgenesh2_kg.6__542__AT5G06070.1 I 0.794
Gorai.012G106300 Gossypium raimondii Gorai.012G106300 I 0.794
BGIOSGA018378 Oryza indica BGIOSGA018378 I 0.794
LjSGA_038753.2 Lotus japonicus LjSGA_038753.2 I 0.794
Cagra.2117s0055 Capsella grandiflora Cagra.2117s0055 I 0.794
Carubv10002935m.g Capsella rubella Carubv10002935m.g I 0.794
RBE Arabidopsis thaliana AT5G06070 D 0.794
MDP0000143134 Malus domestica MDP0000143134 N 0.779
PRUPE_ppa016491mg Prunus persica PRUPE_ppa016491mg N 0.779
orange1.1g037433m.g Citrus sinensis orange1.1g037433m.g N 0.779
TCM_020819 Theobroma cacao TCM_020819 N 0.779
PRUPE_ppa021945mg Prunus persica PRUPE_ppa021945mg N 0.779
Cla021877 Citrullus lanatus Cla021877 N 0.779
Ciclev10006751m.g Citrus clementina Ciclev10006751m.g N 0.779
Carubv10028256m.g Capsella rubella Carubv10028256m.g N 0.779
OS07G0417400 Oryza sativa OS07G0417400 N 0.779
Bostr.3148s0115 Boechera stricta Bostr.3148s0115 N 0.779
Eucgr.H00184 Eucalyptus grandis Eucgr.H00184 N 0.779
evm.TU.supercontig_44.98 Carica papaya evm.TU.supercontig_44.98 N 0.779
Cagra.19122s0001 Capsella grandiflora Cagra.19122s0001 N 0.779
gene30215-v1.0-hybrid Fragaria vesca gene30215-v1.0-hybrid N 0.779
Pm002649 Prunus mume Pm002649 N 0.779
Pm009419 Prunus mume Pm009419 N 0.779
Gorai.011G172000 Gossypium raimondii Gorai.011G172000 N 0.779
scaffold_800693.1 Arabidopsis lyrata scaffold_800693.1 N 0.779
Bo7g065530 Brassica oleracea Bo7g065530 N 0.779
OLONG_012182 Oryza longistaminata OLONG_012182 N 0.779
ONIVA07G09630 Oryza nivara ONIVA07G09630 N 0.779
OB07G18110 Oryza brachyantha OB07G18110 N 0.779
GLYMA10G32810 Glycine max GLYMA10G32810 N 0.779
GSMUA_Achr8G14360_001 Musa acuminata GSMUA_Achr8G14360_001 N 0.779
OBART07G11660 Oryza barthii OBART07G11660 N 0.779
BGIOSGA025569 Oryza indica BGIOSGA025569 N 0.779
GLYMA20G34840 Glycine max GLYMA20G34840 N 0.779
OGLUM07G11160 Oryza glumaepatula OGLUM07G11160 N 0.779
ONIVA07G09640 Oryza nivara ONIVA07G09640 N 0.779
Bra033683 Brassica rapa Bra033683 N 0.779
OPUNC07G10480 Oryza punctata OPUNC07G10480 N 0.779
ORGLA07G0099100 Oryza glaberrima ORGLA07G0099100 N 0.779
ORUFI07G11810 Oryza rufipogon ORUFI07G11810 N 0.779
Bo9g059250 Brassica oleracea Bo9g059250 N 0.779
MTR_1g075430 Medicago truncatula MTR_1g075430 N 0.779
Bra027500 Brassica rapa Bra027500 N 0.779
LPERR07G09750 Leersia perrieri LPERR07G09750 N 0.779
VIT_06s0004g05260 Vitis vinifera VIT_06s0004g05260 N 0.776
AMTR_s00009p00194700 Amborella trichopoda AMTR_s00009p00194700 N 0.776
AMTR_s00012p00258620 Amborella trichopoda AMTR_s00012p00258620 N 0.776
GRMZM2G443109 Zea mays GRMZM2G443109 I 0.769
mgf024356m Mimulus guttatus mgf024356m I 0.769
GRMZM2G409452 Zea mays GRMZM2G409452 I 0.769
BRADI1G52490 Brachypodium distachyon BRADI1G52490 I 0.769
Lus10022204.g Linum usitatissimum Lus10022204.g I 0.769
Pavir.Bb00955 Panicum virgatum Pavir.Bb00955 I 0.769
Lus10021213.g Linum usitatissimum Lus10021213.g I 0.769
GLYMA12G06340 Glycine max GLYMA12G06340 N 0.769
SapurV1A.0007s0800 Salix purpurea SapurV1A.0007s0800 I 0.769
SapurV1A.0292s0190 Salix purpurea SapurV1A.0292s0190 I 0.769
MTR_4g064873 Medicago truncatula MTR_4g064873 N 0.769
Cucsa.117650 Cucumis sativus Cucsa.117650 N 0.769
Cla008348 Citrullus lanatus Cla008348 N 0.769
TRIUR3_25222 Triticum urartu TRIUR3_25222 I 0.769
Traes_2DS_035AA95E3 Triticum aestivum Traes_2DS_035AA95E3 I 0.769
Traes_2AS_099955797 Triticum aestivum Traes_2AS_099955797 I 0.769
Traes_2BS_0544D9D4B Triticum aestivum Traes_2BS_0544D9D4B I 0.769
Si032478m.g Setaria italica Si032478m.g I 0.769
Sb02g009930 Sorghum bicolor Sb02g009930 I 0.769
cassava32634.m1 Manihot esculenta cassava32634.m1 N 0.769
POPTR_0016s10480 Populus trichocarpa POPTR_0016s10480 I 0.769
Pavir.Ba02387 Panicum virgatum Pavir.Ba02387 I 0.769
PRUPE_ppb012667mg Prunus persica PRUPE_ppb012667mg N 0.769
Gorai.002G256500 Gossypium raimondii Gorai.002G256500 N 0.767
TCM_021876 Theobroma cacao TCM_021876 N 0.767
Aquca_003_00162 Aquilegia coerulea Aquca_003_00162 N 0.767
cassava4410.m1 Manihot esculenta cassava4410.m1 N 0.767
28345.m000111 Ricinus communis 28345.m000111 N 0.767
PDK_20s1360411g002 Phoenix dactylifera PDK_20s1360411g002 N 0.766
orange1.1g044013m.g Citrus sinensis orange1.1g044013m.g N 0.766
Ciclev10022375m.g Citrus clementina Ciclev10022375m.g N 0.766
MTR_1g070250 Medicago truncatula MTR_1g070250 N 0.766
Cla006093 Citrullus lanatus Cla006093 N 0.766
PK22236.1 Cannabis sativa PK22236.1 N 0.766
Cucsa.016990 Cucumis sativus Cucsa.016990 N 0.766
GSMUA_Achr11G02150_001 Musa acuminata GSMUA_Achr11G02150_001 N 0.760
Cucsa.321760 Cucumis sativus Cucsa.321760 I 0.757
Cla008944 Citrullus lanatus Cla008944 I 0.757
Si019563m.g Setaria italica Si019563m.g I 0.757
Sb04g037590 Sorghum bicolor Sb04g037590 I 0.757
OB02G44430 Oryza brachyantha OB02G44430 I 0.757
POPTR_0008s16390 Populus trichocarpa POPTR_0008s16390 I 0.757
Lus10022206.g Linum usitatissimum Lus10022206.g I 0.757
GRMZM2G000126 Zea mays GRMZM2G000126 I 0.757
GRMZM2G344974 Zea mays GRMZM2G344974 I 0.757
Pavir.Ab03315 Panicum virgatum Pavir.Ab03315 I 0.757