NEMVEDRAFT_v1g108258 (Nematostella vectensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 NEMVEDRAFT_v1g108258 T124139_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.781 0.763
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.781 0.763
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.781 0.763
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.781 0.763
CG12605
M03691_2.00 		Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
CG12605_1 		0.773 0.825
CG12605
M06139_2.00 		Drosophila melanogaster
CACCTGTKG
CMACAGGTG		 B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481 		0.773 0.825
CG12605
M06140_2.00 		Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK		 B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481 		0.773 0.825
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.763 0.816
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.763 0.816
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.763 0.816
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.763 0.816
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDO40180 C2H2 ZF 15 37
EDO40180 C2H2 ZF 46 68
EDO40180 C2H2 ZF 72 94
EDO40180 C2H2 ZF 100 122
EDO40180 C2H2 ZF 128 149

Links

Other C2H2 ZF family TFs
Other Nematostella vectensis TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scrt1b Danio rerio ENSDARG00000040214 I 0.783
scrt1a Danio rerio ENSDARG00000100821 I 0.783
ENSONIG00000006007 Oreochromis niloticus ENSONIG00000006007 I 0.783
ENSLACG00000003588 Latimeria chalumnae ENSLACG00000003588 I 0.783
scrt2 Xenopus tropicalis XB-GENE-5995512 I 0.783
ENSLOCG00000007573 Lepisosteus oculatus ENSLOCG00000007573 I 0.783
ENSXMAG00000015353 Xiphophorus maculatus ENSXMAG00000015353 I 0.781
SCRT1 Bos taurus ENSBTAG00000046208 I 0.781
ENSCSAG00000008549 Chlorocebus sabaeus ENSCSAG00000008549 I 0.781
ENSCPOG00000024058 Cavia porcellus ENSCPOG00000024058 I 0.781
SCRT1 Callithrix jacchus ENSCJAG00000021406 I 0.781
SCRT1 Homo sapiens ENSG00000261678 D 0.781
ENSXMAG00000014491 Xiphophorus maculatus ENSXMAG00000014491 I 0.781
SCRT1 Gorilla gorilla ENSGGOG00000013612 I 0.781
ENSGMOG00000000629 Gadus morhua ENSGMOG00000000629 I 0.781
scrt1b Gasterosteus aculeatus ENSGACG00000008982 I 0.781
SCRT1 Gasterosteus aculeatus ENSGACG00000004072 I 0.781
Scrt1 Rattus norvegicus ENSRNOG00000025594 I 0.781
scrt1b Takifugu rubripes ENSTRUG00000011637 I 0.781
SCRT1 Dasypus novemcinctus ENSDNOG00000043826 I 0.781
Scrt1 Mus musculus ENSMUSG00000048385 I 0.781
ENSPANG00000017232 Papio anubis ENSPANG00000017232 I 0.781
SCRT1 Sus scrofa ENSSSCG00000025879 I 0.781
scrt1b Oryzias latipes ENSORLG00000008641 I 0.781
ENSPFOG00000005616 Poecilia formosa ENSPFOG00000005616 I 0.781
SMAR010760 Strigamia maritima SMAR010760 I 0.781
ENSPFOG00000017719 Poecilia formosa ENSPFOG00000017719 I 0.781
SPU_018393 Strongylocentrotus purpuratus SPU_018393 I 0.781
ENSONIG00000019809 Oreochromis niloticus ENSONIG00000019809 I 0.781
ENSSTOG00000023184 Ictidomys tridecemlineatus ENSSTOG00000023184 I 0.781
ENSAMXG00000004776 Astyanax mexicanus ENSAMXG00000004776 I 0.781
SCRT1 Takifugu rubripes ENSTRUG00000012719 I 0.781
ENSAMEG00000005557 Ailuropoda melanoleuca ENSAMEG00000005557 I 0.781
ENSOARG00000014008 Ovis aries ENSOARG00000014008 I 0.781
SCRT1 Loxodonta africana ENSLAFG00000031587 I 0.781
SCRT1 Otolemur garnettii ENSOGAG00000026538 I 0.781
scrt1b Tetraodon nigroviridis ENSTNIG00000018384 I 0.781
ENSAPLG00000011730 Anas platyrhynchos ENSAPLG00000011730 I 0.780
SCRT1 Macaca mulatta ENSMMUG00000028886 I 0.780
ENSSHAG00000001992 Sarcophilus harrisii ENSSHAG00000001992 I 0.778
SCRT2 Taeniopygia guttata ENSTGUG00000006801 I 0.778
SCRT2 Meleagris gallopavo ENSMGAG00000016579 I 0.778
ENSFALG00000005718 Ficedula albicollis ENSFALG00000005718 I 0.778
Cmyd_10009565 Chelonia mydas Cmyd_10009565 I 0.778
SCRT2 Anolis carolinensis ENSACAG00000016109 I 0.778
SCRT2 Gallus gallus ENSGALG00000028912 I 0.778
ENSLOCG00000002246 Lepisosteus oculatus ENSLOCG00000002246 I 0.776
estExt_fgenesh2_pm.C_2290002 Branchiostoma floridae estExt_fgenesh2_pm.C_2290002 I 0.775
CGI_10023711 Crassostrea gigas CGI_10023711 I 0.775
GJ16104 Drosophila virilis FBgn0203289 I 0.773
GE20660 Drosophila yakuba FBgn0237965 I 0.773
GD13305 Drosophila simulans FBgn0185024 I 0.773
GK16692 Drosophila willistoni FBgn0218694 I 0.773
GM14024 Drosophila sechellia FBgn0168953 I 0.773
CG12605 Drosophila melanogaster FBgn0035481 D 0.773
GA11715 Drosophila pseudoobscura FBgn0071765 I 0.773
GF24781 Drosophila ananassae FBgn0101774 I 0.773
GI12763 Drosophila mojavensis FBgn0135520 I 0.773
GD13304 Drosophila simulans FBgn0185023 I 0.773
GG14232 Drosophila erecta FBgn0106493 I 0.773
ENSONIG00000016758 Oreochromis niloticus ENSONIG00000016758 I 0.773
TriadG20314 Trichoplax adhaerens TriadG20314 I 0.771
ENSPFOG00000007738 Poecilia formosa ENSPFOG00000007738 I 0.771
HHAL001095-PA Halyomorpha halys HHAL001095-PA I 0.771
tetur08g05890 Tetranychus urticae tetur08g05890 I 0.771
ENSAMXG00000018604 Astyanax mexicanus ENSAMXG00000018604 I 0.771
MCINX009925 Melitaea cinxia MCINX009925 I 0.771
HMEL014701 Heliconius melpomene HMEL014701 I 0.771
ISCW021315 Ixodes scapularis ISCW021315 I 0.771
KGM_21493 Danaus plexippus KGM_21493 I 0.771
ENSAMXG00000018733 Astyanax mexicanus ENSAMXG00000018733 I 0.771
ACYPI004643 Acyrthosiphon pisum ACYPI004643 I 0.771
PXEA_0002510801 Protopolystoma xenopodis PXEA_0002510801 I 0.771
scrt2 Takifugu rubripes ENSTRUG00000007620 I 0.771
scrt2 Tetraodon nigroviridis ENSTNIG00000012473 I 0.771
ENSONIG00000003152 Oreochromis niloticus ENSONIG00000003152 I 0.771
scrt2 Oryzias latipes ENSORLG00000015072 I 0.771
BGIBMGA000607 Bombyx mori BGIBMGA000607 I 0.771
ENSGMOG00000019519 Gadus morhua ENSGMOG00000019519 I 0.771
scrt2 Danio rerio ENSDARG00000056175 I 0.771
ENSXMAG00000011590 Xiphophorus maculatus ENSXMAG00000011590 I 0.771
scrt2 Gasterosteus aculeatus ENSGACG00000011802 I 0.771
SCRT2 Monodelphis domestica ENSMODG00000019528 I 0.770
ENSMEUG00000009675 Macropus eugenii ENSMEUG00000009675 I 0.770
Pvit_17685 Pogona vitticeps Pvit_17685 I 0.770
Ogr05737 Ophisaurus gracilis Ogr05737 I 0.769
ACYPI34938 Acyrthosiphon pisum ACYPI34938 I 0.768
SPAL_0000842500 Strongyloides papillosus SPAL_0000842500 I 0.768
SVE_1799900 Strongyloides venezuelensis SVE_1799900 I 0.768
Sakowv30035375m.g Saccoglossus kowalevskii Sakowv30035375m.g I 0.764
ACUA022497 Anopheles culicifacies ACUA022497 I 0.763
AFAF007486 Anopheles farauti AFAF007486 I 0.763
ACOM031685 Anopheles coluzzii ACOM031685 I 0.763
LCUP005780 Lucilia cuprina LCUP005780 I 0.763
Ocbimv22039583m.g Octopus bimaculoides Ocbimv22039583m.g I 0.763
AFUN002786 Anopheles funestus AFUN002786 I 0.763
ACHR010032 Anopheles christyi ACHR010032 I 0.763
AQUA003879 Anopheles quadriannulatus AQUA003879 I 0.763
MDOA005810 Musca domestica MDOA005810 I 0.763
PPAI000594 Phlebotomus papatasi PPAI000594 I 0.763
scrt Drosophila melanogaster FBgn0004880 D 0.763
LLOJ003272 Lutzomyia longipalpis LLOJ003272 I 0.763
ASIS022059 Anopheles sinensis ASIS022059 I 0.763
AMEM013788 Anopheles merus AMEM013788 I 0.763
GF25020 Drosophila ananassae FBgn0102012 I 0.763
AMEC013076 Anopheles melas AMEC013076 I 0.763
AATE020159 Anopheles atroparvus AATE020159 I 0.763
GM14603 Drosophila sechellia FBgn0169524 I 0.763
AGAP006791 Anopheles gambiae AGAP006791 I 0.763
GH15771 Drosophila grimshawi FBgn0123242 I 0.763
GK17507 Drosophila willistoni FBgn0219506 I 0.763
GI12551 Drosophila mojavensis FBgn0135308 I 0.763
GM11368 Drosophila sechellia FBgn0166311 I 0.763
GD13794 Drosophila simulans FBgn0185494 I 0.763
GJ16103 Drosophila virilis FBgn0203288 I 0.763
MESCA005876 Megaselia scalaris MESCA005876 I 0.763
GG15174 Drosophila erecta FBgn0107427 I 0.763
GE21392 Drosophila yakuba FBgn0238652 I 0.763
MDOA001622 Musca domestica MDOA001622 I 0.762
nRc.2.0.1.g22231 Romanomermis culicivorax nRc.2.0.1.g22231 I 0.762
AGAP006794 Anopheles gambiae AGAP006794 I 0.761
AMEC015586 Anopheles melas AMEC015586 I 0.761
CpipJ_CPIJ004535 Culex pipiens CpipJ_CPIJ004535 I 0.761
AMEM017035 Anopheles merus AMEM017035 I 0.761
CPIJ004535 Culex quinquefasciatus CPIJ004535 I 0.761
ASTEI08595 Anopheles stephensi ASTEI08595 I 0.761
L596_g15116 Steinernema carpocapsae L596_g15116 I 0.761
ASIS012063 Anopheles sinensis ASIS012063 I 0.761
L892_g9690 Steinernema scapterisci L892_g9690 I 0.761
CPIJ017517 Culex quinquefasciatus CPIJ017517 I 0.761
L798_11766 Zootermopsis nevadensis L798_11766 I 0.761
AAEL005176 Aedes aegypti AAEL005176 I 0.761
CpipJ_CPIJ017517 Culex pipiens CpipJ_CPIJ017517 I 0.761
AFUN001835 Anopheles funestus AFUN001835 I 0.761
DAPPUDRAFT_14328 Daphnia pulex DAPPUDRAFT_14328 I 0.761
HHAL001092-PA Halyomorpha halys HHAL001092-PA I 0.761
AAEL009230 Aedes aegypti AAEL009230 I 0.761
AATE010651 Anopheles atroparvus AATE010651 I 0.761
Cflo_09305--XP_001121064.1_APIME Camponotus floridanus Cflo_09305--XP_001121064.1_APIME I 0.761
ACUA020861 Anopheles culicifacies ACUA020861 I 0.761
PHUM474180 Pediculus humanus PHUM474180 I 0.761
ACUA003488 Anopheles culicifacies ACUA003488 I 0.761
CLEC001353 Cimex lectularius CLEC001353 I 0.761
AAEL014359 Aedes aegypti AAEL014359 I 0.761
ACOM031677 Anopheles coluzzii ACOM031677 I 0.761
AFAF017001 Anopheles farauti AFAF017001 I 0.761
LCUP005777 Lucilia cuprina LCUP005777 I 0.760
SMU15013927 Schmidtea mediterranea SMU15013927 I 0.759
BGIBMGA000604 Bombyx mori BGIBMGA000604 I 0.759
L889_g21793 Steinernema feltiae L889_g21793 I 0.759
L893_g27175 Steinernema glaseri L893_g27175 I 0.759
SSTP_0000144900 Strongyloides stercoralis SSTP_0000144900 I 0.758
ALUE_0002049001 Ascaris lumbricoides ALUE_0002049001 I 0.758
RSKR_0000492900 Rhabditophanes kr3021 RSKR_0000492900 I 0.758
PTRK_0000719800 Parastrongyloides trichosuri PTRK_0000719800 I 0.758
TCNE_0000669301 Toxocara canis TCNE_0000669301 I 0.756