NEMVEDRAFT_v1g118750 (Nematostella vectensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 NEMVEDRAFT_v1g118750 T124156_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YY1
M08237_2.00
Homo sapiens
VNVGCVGCCATBTTD

HAAVATGGCBGCBNB
ChIP-seq
Najafabadi et al.(2015b)
YY1
0.824 0.978
YY1
M02877_2.00
Homo sapiens
NVSRCCATNDH

DHNATGGYSBN
SELEX
Jolma et al.(2013)
YY1_1
0.824 0.967
YY1
M04406_2.00
Homo sapiens
NDCCATYTTKRRBNDWNHGTGCK

MGCACDNWHNVYYMAARATGGHN
SELEX
Yin et al.(2017)
YY1_FL_HT-SELEX_1
0.824 0.967
YY1
M04407_2.00
Homo sapiens
NKMCGCCATYTTGN

NCAARATGGCGKMN
SELEX
Yin et al.(2017)
YY1_FL_HT-SELEX_2
0.824 0.967
YY1
M05845_2.00
Homo sapiens
NNNVGCCATNWYD

HRWNATGGCBNNN
SMiLE-seq
Isakova et al.(2017)
YY1
0.824 0.967
YY1
M08288_2.00
Homo sapiens
GCCGCCATBKYB

VRMVATGGCGGC
ChIP-seq
Schmitges et al.(2016)
P25490_1-4.RCADE
0.824 0.967
YY1
M08085_2.00
Homo sapiens
KCVGCCATBTTK

MAAVATGGCBGM
ChIP-seq
Mathelier et al.(2014)
MA0095.2
0.824 0.967
YY1
M07855_2.00
Homo sapiens
VNVGCCGCCATBTTK

MAAVATGGCGGCBNB
ChIP-seq
Gerstein et al.(2012)
GM12878_YY1_HudsonAlpha
0.824 0.967
YY1
M07856_2.00
Homo sapiens
GCSGCCATBTT

AAVATGGCSGC
ChIP-seq
Gerstein et al.(2012)
GM12891_YY1_HudsonAlpha
0.824 0.967
YY1
M07857_2.00
Homo sapiens
BSNVGCSGCCATBTT

AAVATGGCSGCBNSV
ChIP-seq
Gerstein et al.(2012)
GM12892_YY1_HudsonAlpha
0.824 0.967
YY1
M07858_2.00
Homo sapiens
NNVGCSGCCATBTTK

MAAVATGGCSGCBNN
ChIP-seq
Gerstein et al.(2012)
H1-hESC_YY1_HudsonAlpha
0.824 0.967
YY1
M07859_2.00
Homo sapiens
SBSGCSGCCATBTTK

MAAVATGGCSGCSVS
ChIP-seq
Gerstein et al.(2012)
K562b_YY1_UCD
0.824 0.967
YY1
M07860_2.00
Homo sapiens
GCCGCCATBTTKNNN

NNNMAAVATGGCGGC
ChIP-seq
Gerstein et al.(2012)
K562_YY1_HudsonAlpha
0.824 0.967
YY1
M07861_2.00
Homo sapiens
VGCSGCCATBTTK

MAAVATGGCSGCB
ChIP-seq
Gerstein et al.(2012)
NT2-D1_YY1_UCD
0.824 0.967
YY1
M08865_2.00
Homo sapiens
GCCGCCATYTTK

MAARATGGCGGC
Misc
Kulakovskiy et al.(2013)
TYY1_HUMAN.H11MO.0.A
0.824 0.967
Yy1
M08971_2.00
Mus musculus
GCCGCCATBTTB

VAAVATGGCGGC
Misc
Kulakovskiy et al.(2013)
TYY1_MOUSE.H11MO.0.A
0.824 0.967
YY1
M10138_2.00
Homo sapiens
NVNNDCCATNTWNNVWN

NWBNNWANATGGHNNBN
Transfac
Matys et al.(2006)
V$YY1_01
0.824 0.967
YY1
M10139_2.00
Homo sapiens
NNNSBGCCATCTDSNHTSND

HNSADNSHAGATGGCVSNNN
Transfac
Matys et al.(2006)
V$YY1_02
0.824 0.967
YY1
M10140_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_03
0.824 0.967
YY1
M10141_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_07
0.824 0.967
YY1
M10142_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_08
0.824 0.967
YY1
M10143_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_Q4_01
0.824 0.967
YY1
M10144_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_Q6_02
0.824 0.967
YY1
M10145_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_Q6_03
0.824 0.967
YY1
M10146_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_Q6
0.824 0.967
YY1
M04408_2.00
Homo sapiens
NDCCATYTTKRRCDDWWHGTGCY

RGCACDWWHHGYYMAARATGGHN
SELEX
Yin et al.(2017)
YY1_FL_Methyl-HT-SELEX_1
0.824 0.967
YY1
M04409_2.00
Homo sapiens
RKCSGCCATYTTGD

HCAARATGGCSGMY
SELEX
Yin et al.(2017)
YY1_FL_Methyl-HT-SELEX_2
0.824 0.967
TYY2_RAT
M10385_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY2
0.819 0.902
pho
M06053_2.00
Drosophila melanogaster
KNVGCCATDAHNSY

RSNDTHATGGCBNM
B1H
Zhu et al.(2011)
pho_FlyReg_FBgn0002521
0.812 0.935
pho
M06054_2.00
Drosophila melanogaster
KCCGCCATHWTK

MAWDATGGCGGM
B1H
Zhu et al.(2011)
pho_SANGER_10_FBgn0002521
0.812 0.935
pho
M06055_2.00
Drosophila melanogaster
NKBCGCCATHWTKNN

NNMAWDATGGCGVMN
B1H
Zhu et al.(2011)
pho_SOLEXA_5_FBgn0002521
0.812 0.935
phol
M06144_2.00
Drosophila melanogaster
CGCCATHTTK

MAADATGGCG
B1H
Zhu et al.(2011)
phol_SANGER_5_FBgn0035997
0.764 0.815
phol
M06145_2.00
Drosophila melanogaster
NKNCGCCATNTTKNN

NNMAANATGGCGNMN
B1H
Zhu et al.(2011)
phol_SOLEXA_5_FBgn0035997
0.764 0.815
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDO36763 C2H2 ZF 3 27
EDO36763 C2H2 ZF 32 54
EDO36763 C2H2 ZF 60 84
EDO36763 C2H2 ZF 90 114

Links

Other C2H2 ZF family TFs
Other Nematostella vectensis TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TBX6 Homo sapiens ENSG00000149922 D 0.000
ENSOARG00000004040 Ovis aries ENSOARG00000004040 I 0.000
TBX6 Oryctolagus cuniculus ENSOCUG00000026026 I 0.000
TBX6 Otolemur garnettii ENSOGAG00000011659 I 0.000
TBX6 Ochotona princeps ENSOPRG00000009784 I 0.000
ENSPANG00000000556 Papio anubis ENSPANG00000000556 I 0.000
TBX6 Procavia capensis ENSPCAG00000000071 I 0.000
ENSPPYG00000007242 Pongo abelii ENSPPYG00000007242 I 0.000
CapteG163410 Capitella teleta CapteG163410 I 0.000
TBX6 Pan troglodytes ENSPTRG00000007985 I 0.000
TBX6 Pteropus vampyrus ENSPVAG00000010556 I 0.000
Tbx6 Rattus norvegicus ENSRNOG00000019771 I 0.000
ENSSTOG00000000869 Ictidomys tridecemlineatus ENSSTOG00000000869 I 0.000
TBX6 Tursiops truncatus ENSTTRG00000005534 I 0.000
ENSBTAP00000011919-D1 Bos grunniens ENSBTAP00000011919-D1 I 0.000
Myotis_brandtii_TBX6_10014444 Myotis brandtii Myotis_brandtii_TBX6_10014444 I 0.000
csin100383 Clonorchis sinensis csin100383 I 0.000
ENSNLEG00000002044 Nomascus leucogenys ENSNLEG00000002044 I 0.000
Tbx6 Mus musculus ENSMUSG00000030699 I 0.000
TBX6 Bos taurus ENSBTAG00000009046 I 0.000
TBX6 Callithrix jacchus ENSCJAG00000035904 I 0.000
TBX6 Cavia porcellus ENSCPOG00000021165 I 0.000
ENSCSAG00000006175 Chlorocebus sabaeus ENSCSAG00000006175 I 0.000
TBX6 Equus caballus ENSECAG00000022374 I 0.000
ENSEEUG00000012843 Erinaceus europaeus ENSEEUG00000012843 I 0.000
TBX6 Echinops telfairi ENSETEG00000019233 I 0.000
TBX6 Felis catus ENSFCAG00000014172 I 0.000
TBX6 Gorilla gorilla ENSGGOG00000012924 I 0.000
TBX6 Loxodonta africana ENSLAFG00000017884 I 0.000
TBX6 Microcebus murinus ENSMICG00000009134 I 0.000
TBX6 Myotis lucifugus ENSMLUG00000011244 I 0.000
TBX6 Macaca mulatta ENSMMUG00000000981 I 0.000
TBX6 Monodelphis domestica ENSMODG00000015682 I 0.000
ENSMPUG00000012586 Mustela putorius furo ENSMPUG00000012586 I 0.000
T265_12717 Opisthorchis viverrini T265_12717 I 0.000