OB03G22700 (Oryza brachyantha)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OB03G22700 T124579_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.766 0.756
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.766 0.756
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.756 0.756
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB03G22700.1 C2H2 ZF 55 75
OB03G22700.1 C2H2 ZF 102 122

Links

Other C2H2 ZF family TFs
Other Oryza brachyantha TFs

244 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORGLA03G0122200 Oryza glaberrima ORGLA03G0122200 I 0.808
ORUFI03G13310 Oryza rufipogon ORUFI03G13310 I 0.808
OS03G0279700 Oryza sativa OS03G0279700 I 0.808
OMERI03G11850 Oryza meridionalis OMERI03G11850 I 0.808
OPUNC03G12220 Oryza punctata OPUNC03G12220 I 0.808
BGIOSGA010987 Oryza indica BGIOSGA010987 I 0.808
OGLUM03G12700 Oryza glumaepatula OGLUM03G12700 I 0.808
ONIVA01G18540 Oryza nivara ONIVA01G18540 I 0.808
Traes_4AS_D4763E468 Triticum aestivum Traes_4AS_D4763E468 I 0.808
LPERR03G11200 Leersia perrieri LPERR03G11200 I 0.808
Pavir.Ib01297 Panicum virgatum Pavir.Ib01297 I 0.806
Pavir.Ia03651 Panicum virgatum Pavir.Ia03651 I 0.806
Si037660m.g Setaria italica Si037660m.g I 0.806
GRMZM2G112251 Zea mays GRMZM2G112251 I 0.806
GRMZM2G048154 Zea mays GRMZM2G048154 I 0.806
Sb09g022660 Sorghum bicolor Sb09g022660 I 0.801
AC206217.2_FG006 Zea mays AC206217.2_FG006 I 0.801
Pavir.J32634 Panicum virgatum Pavir.J32634 I 0.795
Pavir.Ib04509 Panicum virgatum Pavir.Ib04509 I 0.794
Pavir.Ia00294 Panicum virgatum Pavir.Ia00294 I 0.794
Pavir.Ea03334 Panicum virgatum Pavir.Ea03334 I 0.793
GLYMA13G19560 Glycine max GLYMA13G19560 I 0.791
LPERR05G15220 Leersia perrieri LPERR05G15220 I 0.790
Traes_1DS_CE96E8BF0 Triticum aestivum Traes_1DS_CE96E8BF0 I 0.784
F775_52535 Aegilops tauschii F775_52535 I 0.784
Traes_1AS_B282BFB83 Triticum aestivum Traes_1AS_B282BFB83 I 0.784
Traes_1BS_22E395F75 Triticum aestivum Traes_1BS_22E395F75 I 0.784
Gorai.013G023300 Gossypium raimondii Gorai.013G023300 I 0.782
evm.TU.contig_30912.1 Carica papaya evm.TU.contig_30912.1 I 0.782
Cla004091 Citrullus lanatus Cla004091 I 0.782
Eucgr.G02910 Eucalyptus grandis Eucgr.G02910 I 0.782
OPUNC05G00940 Oryza punctata OPUNC05G00940 I 0.782
SapurV1A.0038s0750 Salix purpurea SapurV1A.0038s0750 I 0.782
ORUFI05G01070 Oryza rufipogon ORUFI05G01070 I 0.782
ORGLA05G0010800 Oryza glaberrima ORGLA05G0010800 I 0.782
BGIOSGA018935 Oryza indica BGIOSGA018935 I 0.782
LPERR05G01000 Leersia perrieri LPERR05G01000 I 0.782
SapurV1A.0095s0590 Salix purpurea SapurV1A.0095s0590 I 0.782
ONIVA05G01090 Oryza nivara ONIVA05G01090 I 0.782
OGLUM05G01060 Oryza glumaepatula OGLUM05G01060 I 0.782
OBART05G01050 Oryza barthii OBART05G01050 I 0.782
VIT_06s0004g04180 Vitis vinifera VIT_06s0004g04180 I 0.782
chr5.CM0180.20.nc Lotus japonicus chr5.CM0180.20.nc I 0.782
VIT_13s0019g00480 Vitis vinifera VIT_13s0019g00480 I 0.782
Gorai.011G254200 Gossypium raimondii Gorai.011G254200 I 0.782
MTR_7g023560 Medicago truncatula MTR_7g023560 I 0.782
gene18204-v1.0-hybrid Fragaria vesca gene18204-v1.0-hybrid I 0.782
gene18205-v1.0-hybrid Fragaria vesca gene18205-v1.0-hybrid I 0.782
Gorai.011G254300 Gossypium raimondii Gorai.011G254300 I 0.782
Pm002762 Prunus mume Pm002762 I 0.782
OMERI05G01120 Oryza meridionalis OMERI05G01120 I 0.782
GSMUA_Achr10G03700_001 Musa acuminata GSMUA_Achr10G03700_001 I 0.782
GLYMA10G43630 Glycine max GLYMA10G43630 I 0.782
cassava9455.m1 Manihot esculenta cassava9455.m1 I 0.782
PRUPE_ppa022066mg Prunus persica PRUPE_ppa022066mg I 0.782
GLYMA18G52410 Glycine max GLYMA18G52410 I 0.782
Cucsa.165460 Cucumis sativus Cucsa.165460 I 0.782
Sb09g001560 Sorghum bicolor Sb09g001560 I 0.782
Pavir.Ca00650 Panicum virgatum Pavir.Ca00650 I 0.782
Solyc05g054650.1 Solanum lycopersicum Solyc05g054650.1 I 0.782
29585.m000611 Ricinus communis 29585.m000611 I 0.782
Si023353m.g Setaria italica Si023353m.g I 0.782
GLYMA02G10490 Glycine max GLYMA02G10490 I 0.782
POPTR_0010s21650 Populus trichocarpa POPTR_0010s21650 I 0.782
GLYMA20G23180 Glycine max GLYMA20G23180 I 0.782
Solyc05g054660.1 Solanum lycopersicum Solyc05g054660.1 I 0.782
Lus10030330.g Linum usitatissimum Lus10030330.g I 0.782
PGSC0003DMG400023547 Solanum tuberosum PGSC0003DMG400023547 I 0.782
GSMUA_Achr10G13540_001 Musa acuminata GSMUA_Achr10G13540_001 I 0.782
OS05G0114400 Oryza sativa OS05G0114400 I 0.782
Aquca_027_00274 Aquilegia coerulea Aquca_027_00274 I 0.782
mgf023249m Mimulus guttatus mgf023249m I 0.782
MDP0000237150 Malus domestica MDP0000237150 I 0.782
POPTR_0008s05110 Populus trichocarpa POPTR_0008s05110 I 0.782
PGSC0003DMG400023518 Solanum tuberosum PGSC0003DMG400023518 I 0.782
Bostr.23794s0343 Boechera stricta Bostr.23794s0343 I 0.781
Ciclev10013311m.g Citrus clementina Ciclev10013311m.g I 0.781
Gorai.006G176100 Gossypium raimondii Gorai.006G176100 I 0.781
fgenesh2_kg.4__1796__AT2G37430.1 Arabidopsis lyrata fgenesh2_kg.4__1796__AT2G37430.1 I 0.781
Thhalv10017303m.g Eutrema salsugineum Thhalv10017303m.g I 0.781
GSMUA_Achr9G03210_001 Musa acuminata GSMUA_Achr9G03210_001 I 0.781
GSMUA_Achr1G03310_001 Musa acuminata GSMUA_Achr1G03310_001 I 0.781
GLYMA03G33050 Glycine max GLYMA03G33050 I 0.781
orange1.1g031966m.g Citrus sinensis orange1.1g031966m.g I 0.781
GLYMA19G35740 Glycine max GLYMA19G35740 I 0.781
LjSGA_020980.2 Lotus japonicus LjSGA_020980.2 I 0.781
Bra039806 Brassica rapa Bra039806 I 0.781
MTR_1g067650 Medicago truncatula MTR_1g067650 I 0.781
Gorai.006G104800 Gossypium raimondii Gorai.006G104800 I 0.781
MTR_1g067640 Medicago truncatula MTR_1g067640 I 0.781
Gorai.006G176000 Gossypium raimondii Gorai.006G176000 I 0.781
Gorai.012G006900 Gossypium raimondii Gorai.012G006900 I 0.781
PGSC0003DMG400015532 Solanum tuberosum PGSC0003DMG400015532 I 0.780
PGSC0003DMG400015531 Solanum tuberosum PGSC0003DMG400015531 I 0.780
PGSC0003DMG400015533 Solanum tuberosum PGSC0003DMG400015533 I 0.780
PGSC0003DMG400015534 Solanum tuberosum PGSC0003DMG400015534 I 0.780
GSMUA_Achr11G02250_001 Musa acuminata GSMUA_Achr11G02250_001 I 0.780
PGSC0003DMG400015557 Solanum tuberosum PGSC0003DMG400015557 I 0.780
GSMUA_Achr11G21920_001 Musa acuminata GSMUA_Achr11G21920_001 I 0.780
Cagra.0666s0001 Capsella grandiflora Cagra.0666s0001 I 0.780
28637.m000203 Ricinus communis 28637.m000203 I 0.780
cassava35212.m1 Manihot esculenta cassava35212.m1 I 0.780
Bra005197 Brassica rapa Bra005197 I 0.780
GSMUA_AchrUn_randomG07580_001 Musa acuminata GSMUA_AchrUn_randomG07580_001 I 0.780
Carubv10024141m.g Capsella rubella Carubv10024141m.g I 0.780
ZAT11 Arabidopsis thaliana AT2G37430 I 0.780
Aquca_010_00703 Aquilegia coerulea Aquca_010_00703 I 0.779
GSMUA_Achr11G23970_001 Musa acuminata GSMUA_Achr11G23970_001 I 0.779
Lus10040312.g Linum usitatissimum Lus10040312.g I 0.778
MLOC_39001 Hordeum vulgare MLOC_39001 I 0.778
BRADI2G37430 Brachypodium distachyon BRADI2G37430 I 0.778
TRIUR3_11899 Triticum urartu TRIUR3_11899 I 0.778
Lus10023433.g Linum usitatissimum Lus10023433.g I 0.778
GSMUA_Achr6G15360_001 Musa acuminata GSMUA_Achr6G15360_001 I 0.777
PRUPE_ppa011762mg Prunus persica PRUPE_ppa011762mg I 0.777
MDP0000257423 Malus domestica MDP0000257423 I 0.777
gene26659-v1.0-hybrid Fragaria vesca gene26659-v1.0-hybrid I 0.777
Pm018761 Prunus mume Pm018761 I 0.777
MDP0000137826 Malus domestica MDP0000137826 I 0.777
Ciclev10032922m.g Citrus clementina Ciclev10032922m.g I 0.776
Traes_1BS_527ED00B9 Triticum aestivum Traes_1BS_527ED00B9 I 0.776
Traes_1AS_8F01029FE Triticum aestivum Traes_1AS_8F01029FE I 0.776
Eucgr.A01231 Eucalyptus grandis Eucgr.A01231 I 0.776
TRIUR3_04728 Triticum urartu TRIUR3_04728 I 0.776
Ciclev10032899m.g Citrus clementina Ciclev10032899m.g I 0.776
Traes_1DS_D1F453705 Triticum aestivum Traes_1DS_D1F453705 I 0.776
Traes_1DS_75AF80583 Triticum aestivum Traes_1DS_75AF80583 I 0.776
Traes_1BS_7B7D5282B Triticum aestivum Traes_1BS_7B7D5282B I 0.776
GSMUA_Achr5G29140_001 Musa acuminata GSMUA_Achr5G29140_001 I 0.776
orange1.1g041414m.g Citrus sinensis orange1.1g041414m.g I 0.776
GLYMA10G05190 Glycine max GLYMA10G05190 I 0.776
orange1.1g040287m.g Citrus sinensis orange1.1g040287m.g I 0.776
GSMUA_Achr11G24480_001 Musa acuminata GSMUA_Achr11G24480_001 I 0.776
PGSC0003DMG401030312 Solanum tuberosum PGSC0003DMG401030312 I 0.776
GSMUA_Achr1G01260_001 Musa acuminata GSMUA_Achr1G01260_001 I 0.776
orange1.1g044181m.g Citrus sinensis orange1.1g044181m.g I 0.776
Ciclev10032889m.g Citrus clementina Ciclev10032889m.g I 0.776
Lus10024428.g Linum usitatissimum Lus10024428.g I 0.776
Solyc06g075780.1 Solanum lycopersicum Solyc06g075780.1 I 0.776
cassava39064.m1 Manihot esculenta cassava39064.m1 I 0.776
GRMZM2G307402 Zea mays GRMZM2G307402 I 0.775
Bra030981 Brassica rapa Bra030981 I 0.775
Bo4g030570 Brassica oleracea Bo4g030570 I 0.775
Bra017188 Brassica rapa Bra017188 I 0.775
Bo4g186920 Brassica oleracea Bo4g186920 I 0.775
Pavir.J04850 Panicum virgatum Pavir.J04850 I 0.774
Sb10g031270 Sorghum bicolor Sb10g031270 I 0.774
Si008395m.g Setaria italica Si008395m.g I 0.774
Ca_07663 Cicer arietinum Ca_07663 I 0.773
GLYMA03G33060 Glycine max GLYMA03G33060 I 0.772
Eucgr.A01233 Eucalyptus grandis Eucgr.A01233 I 0.772
GLYMA03G33070 Glycine max GLYMA03G33070 I 0.772
GLYMA19G35770 Glycine max GLYMA19G35770 I 0.772
Si003051m.g Setaria italica Si003051m.g I 0.771
GLYMA10G05210 Glycine max GLYMA10G05210 I 0.771
Cagra.0612s0086 Capsella grandiflora Cagra.0612s0086 I 0.771
MTR_1g067660 Medicago truncatula MTR_1g067660 I 0.771
Carubv10018114m.g Capsella rubella Carubv10018114m.g I 0.771
Bostr.11793s0034 Boechera stricta Bostr.11793s0034 I 0.771
GLYMA13G19570 Glycine max GLYMA13G19570 I 0.771
Bo00576s170 Brassica oleracea Bo00576s170 I 0.771
Bra003148 Brassica rapa Bra003148 I 0.771
TRAES3BF117500110CFD_g Triticum aestivum TRAES3BF117500110CFD_g I 0.771
Pavir.Eb03660 Panicum virgatum Pavir.Eb03660 I 0.770
GRMZM2G376061 Zea mays GRMZM2G376061 I 0.770
Sb03g039270 Sorghum bicolor Sb03g039270 I 0.770
LPERR01G31500 Leersia perrieri LPERR01G31500 I 0.770
TRAES3BF127400030CFD_g Triticum aestivum TRAES3BF127400030CFD_g I 0.770
MTR_7g100100 Medicago truncatula MTR_7g100100 I 0.770
GRMZM2G112799 Zea mays GRMZM2G112799 I 0.770
Cla018516 Citrullus lanatus Cla018516 I 0.770
Cucsa.065930 Cucumis sativus Cucsa.065930 I 0.770
cassava8924.m1 Manihot esculenta cassava8924.m1 I 0.770
BRADI2G54500 Brachypodium distachyon BRADI2G54500 I 0.770
Pavir.J14338 Panicum virgatum Pavir.J14338 I 0.770
GRMZM2G061897 Zea mays GRMZM2G061897 I 0.770
OMERI01G33680 Oryza meridionalis OMERI01G33680 I 0.769
ONIVA01G41600 Oryza nivara ONIVA01G41600 I 0.769
OPUNC01G35440 Oryza punctata OPUNC01G35440 I 0.769
OGLUM01G40530 Oryza glumaepatula OGLUM01G40530 I 0.769
OMERI01G33710 Oryza meridionalis OMERI01G33710 I 0.769
BGIOSGA000523 Oryza indica BGIOSGA000523 I 0.769
OPUNC01G35470 Oryza punctata OPUNC01G35470 I 0.769
GRMZM5G804618 Zea mays GRMZM5G804618 I 0.769
GSMUA_Achr10G13530_001 Musa acuminata GSMUA_Achr10G13530_001 I 0.769
LPERR01G31460 Leersia perrieri LPERR01G31460 I 0.769
BGIOSGA004768 Oryza indica BGIOSGA004768 I 0.769
OGLUM01G40470 Oryza glumaepatula OGLUM01G40470 I 0.769
ONIVA01G41740 Oryza nivara ONIVA01G41740 I 0.769
ORUFI01G40000 Oryza rufipogon ORUFI01G40000 I 0.769
OS01G0838600 Oryza sativa OS01G0838600 I 0.769
ORGLA01G0304700 Oryza glaberrima ORGLA01G0304700 I 0.769
OS01G0839100 Oryza sativa OS01G0839100 I 0.769
ORGLA01G0304300 Oryza glaberrima ORGLA01G0304300 I 0.769
AT3G53600 Arabidopsis thaliana AT3G53600 D 0.766
Eucgr.A01230 Eucalyptus grandis Eucgr.A01230 I 0.766
TCM_022001 Theobroma cacao TCM_022001 I 0.766
BRADI2G23160 Brachypodium distachyon BRADI2G23160 I 0.766
fgenesh2_kg.5__1736__AT3G53600.1 Arabidopsis lyrata fgenesh2_kg.5__1736__AT3G53600.1 I 0.766
LjT09F05.130.nd Lotus japonicus LjT09F05.130.nd I 0.766
Bo6g067580 Brassica oleracea Bo6g067580 I 0.765
Thhalv10010956m.g Eutrema salsugineum Thhalv10010956m.g I 0.765
PGSC0003DMG400039582 Solanum tuberosum PGSC0003DMG400039582 I 0.764
PGSC0003DMG400030311 Solanum tuberosum PGSC0003DMG400030311 I 0.764
Pavir.Hb00023 Panicum virgatum Pavir.Hb00023 I 0.764
Pavir.Ha00193 Panicum virgatum Pavir.Ha00193 I 0.764
Pavir.Da01393 Panicum virgatum Pavir.Da01393 I 0.764
Traes_4DS_276818E4F Triticum aestivum Traes_4DS_276818E4F I 0.763
F775_14723 Aegilops tauschii F775_14723 I 0.763
cassava42054.valid.m1 Manihot esculenta cassava42054.valid.m1 I 0.760
Cucsa.379890 Cucumis sativus Cucsa.379890 I 0.759
Cla013490 Citrullus lanatus Cla013490 I 0.759
Eucgr.B02398 Eucalyptus grandis Eucgr.B02398 I 0.758
Eucgr.B02394 Eucalyptus grandis Eucgr.B02394 I 0.758
Pavir.J03079 Panicum virgatum Pavir.J03079 I 0.758
BRADI4G09410 Brachypodium distachyon BRADI4G09410 I 0.758
Eucgr.B02395 Eucalyptus grandis Eucgr.B02395 I 0.758
cassava16287.m1 Manihot esculenta cassava16287.m1 I 0.758
Eucgr.B02397 Eucalyptus grandis Eucgr.B02397 I 0.758
Eucgr.B02390 Eucalyptus grandis Eucgr.B02390 I 0.758
PK27255.1 Cannabis sativa PK27255.1 I 0.758
Eucgr.A01232 Eucalyptus grandis Eucgr.A01232 I 0.758
OPUNC03G12210 Oryza punctata OPUNC03G12210 I 0.758
29154.m000218 Ricinus communis 29154.m000218 I 0.758
SapurV1A.4260s0020 Salix purpurea SapurV1A.4260s0020 I 0.758
Gorai.010G202400 Gossypium raimondii Gorai.010G202400 I 0.758
evm.TU.supercontig_190.30 Carica papaya evm.TU.supercontig_190.30 I 0.758
Aquca_010_00704 Aquilegia coerulea Aquca_010_00704 I 0.758
SapurV1A.0040s0050 Salix purpurea SapurV1A.0040s0050 I 0.758
SapurV1A.0008s0970 Salix purpurea SapurV1A.0008s0970 I 0.757
TCM_041899 Theobroma cacao TCM_041899 I 0.757
POPTR_0009s03280 Populus trichocarpa POPTR_0009s03280 I 0.757
Ciclev10029464m.g Citrus clementina Ciclev10029464m.g I 0.757
Gorai.003G136200 Gossypium raimondii Gorai.003G136200 I 0.757
evm.TU.supercontig_163.32 Carica papaya evm.TU.supercontig_163.32 I 0.757
orange1.1g031430m.g Citrus sinensis orange1.1g031430m.g I 0.757
POPTR_0001s24250 Populus trichocarpa POPTR_0001s24250 I 0.757
cassava15802.m1 Manihot esculenta cassava15802.m1 I 0.757
POPTR_1833s00200 Populus trichocarpa POPTR_1833s00200 I 0.757
POPTR_0006s12340 Populus trichocarpa POPTR_0006s12340 I 0.757
GSMUA_Achr10G06730_001 Musa acuminata GSMUA_Achr10G06730_001 I 0.756
GSMUA_Achr1G06720_001 Musa acuminata GSMUA_Achr1G06720_001 I 0.756
AT5G03510 Arabidopsis thaliana AT5G03510 D 0.756
Solyc11g073060.1 Solanum lycopersicum Solyc11g073060.1 I 0.756