CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OCS_03275
(
Ophiocordyceps sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
OCS_03275
T124682_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06907
M01889_2.00
Neurospora crassa
YYMGCCHCNN
NNGDGGCKRR
PBM
Weirauch et al.(2014)
pTH9682
0.785
0.896
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EQL01010
C2H2 ZF
481
505
WTCLFDDCGKKFGRKENIKSHVQTH
EQL01010
C2H2 ZF
511
533
YQCPTCKKCFVRQHDLKRHAKIH
EQL01010
C2H2 ZF
539
559
YPCECGNSFARHDALTRHRQR
Links
Other
C2H2 ZF
family TFs
Other
Ophiocordyceps sinensis
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29767.m000200
Ricinus communis
29767.m000200
N
0.000
Aquca_009_00954
Aquilegia coerulea
Aquca_009_00954
N
0.000
cassava2361.valid.m1
Manihot esculenta
cassava2361.valid.m1
N
0.000
cassava31335.valid.m1
Manihot esculenta
cassava31335.valid.m1
N
0.000
Ca_21138
Cicer arietinum
Ca_21138
N
0.000
Ciclev10011141m.g
Citrus clementina
Ciclev10011141m.g
N
0.000
Ciclev10030787m.g
Citrus clementina
Ciclev10030787m.g
N
0.000
Cla018179
Citrullus lanatus
Cla018179
N
0.000
Cucsa.175500
Cucumis sativus
Cucsa.175500
N
0.000
Eucgr.A01279
Eucalyptus grandis
Eucgr.A01279
N
0.000
gene18433-v1.0-hybrid
Fragaria vesca
gene18433-v1.0-hybrid
N
0.000
GLYMA03G10320
Glycine max
GLYMA03G10320
N
0.000
GLYMA07G15950
Glycine max
GLYMA07G15950
N
0.000
Gorai.007G376400
Gossypium raimondii
Gorai.007G376400
N
0.000
Gorai.011G266200
Gossypium raimondii
Gorai.011G266200
N
0.000
Lus10024384.g
Linum usitatissimum
Lus10024384.g
N
0.000
mgf011165m
Mimulus guttatus
mgf011165m
N
0.000
MTR_7g062120
Medicago truncatula
MTR_7g062120
N
0.000
orange1.1g004488m.g
Citrus sinensis
orange1.1g004488m.g
N
0.000
orange1.1g004514m.g
Citrus sinensis
orange1.1g004514m.g
N
0.000
PGSC0003DMG400008904
Solanum tuberosum
PGSC0003DMG400008904
N
0.000
PGSC0003DMG400019200
Solanum tuberosum
PGSC0003DMG400019200
N
0.000
PK20526.1
Cannabis sativa
PK20526.1
N
0.000
Pm002685
Prunus mume
Pm002685
N
0.000
POPTR_0006s08690
Populus trichocarpa
POPTR_0006s08690
N
0.000
POPTR_0008s05750
Populus trichocarpa
POPTR_0008s05750
N
0.000
PRUPE_ppa001883mg
Prunus persica
PRUPE_ppa001883mg
N
0.000
SapurV1A.0001s1700
Salix purpurea
SapurV1A.0001s1700
N
0.000
SapurV1A.0451s0060
Salix purpurea
SapurV1A.0451s0060
N
0.000
Solyc09g010920.1
Solanum lycopersicum
Solyc09g010920.1
N
0.000
Solyc10g086530.1
Solanum lycopersicum
Solyc10g086530.1
N
0.000
TCM_021920
Theobroma cacao
TCM_021920
N
0.000
TCM_042705
Theobroma cacao
TCM_042705
N
0.000
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.000
VIT_08s0007g00510
Vitis vinifera
VIT_08s0007g00510
N
0.000