OGLUM05G20400 (Oryza glumaepatula)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OGLUM05G20400 T124734_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZAT7
M01855_2.00
Arabidopsis thaliana
NVDBRCACTNNNN

NNNNAGTGYVHBN
PBM
Weirauch et al.(2014)
pTH7540
0.773 0.783
AT3G46070
M06813_2.00
Arabidopsis thaliana
HYHHYHTCACTYHHH

DDDRAGTGADRDDRD
Dap-seq
OMalley et al.(2016)
AT3G46070_col_a
0.761 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM05G20400.1 C2H2 ZF 33 55
OGLUM05G20400.1 C2H2 ZF 90 112

Links

Other C2H2 ZF family TFs
Other Oryza glumaepatula TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
RO3G_08081 Rhizopus oryzae RO3G_08081 I 0.000
PHACADRAFT_258404 Phanerochaete carnosa PHACADRAFT_258404 I 0.000
PILCRDRAFT_94123 Piloderma croceum PILCRDRAFT_94123 I 0.000
PLEOSDRAFT_1083727 Pleurotus ostreatus PLEOSDRAFT_1083727 I 0.000
SCHCODRAFT_257622 Schizophyllum commune SCHCODRAFT_257622 I 0.000
SERLA73DRAFT_72478 Serpula lacrymans SERLA73DRAFT_72478 I 0.000
estExt_fgeneshMC_kg.C_60018 Mucor circinelloides estExt_fgeneshMC_kg.C_60018 I 0.000
fgeneshMC_pm.9_#_186 Mucor circinelloides fgeneshMC_pm.9_#_186 I 0.000
fgeneshPB_pg.22__185 Phycomyces blakesleeanus fgeneshPB_pg.22__185 I 0.000
fgeneshPB_pg.2__402 Phycomyces blakesleeanus fgeneshPB_pg.2__402 I 0.000
PAXRUDRAFT_830673 Paxillus rubicundulus PAXRUDRAFT_830673 I 0.000
MELLADRAFT_118331 Melampsora laricipopulina MELLADRAFT_118331 I 0.000
AGABI2DRAFT_221018 Agaricus bisporus AGABI2DRAFT_221018 I 0.000
BN946_scf184656.g9 Trametes cinnabarina BN946_scf184656.g9 I 0.000
CC1G_03210 Coprinopsis cinerea CC1G_03210 I 0.000
CY34DRAFT_590075 Suillus luteus CY34DRAFT_590075 I 0.000
gw1.3.368.1 Heterobasidion annosum gw1.3.368.1 I 0.000
GLOINDRAFT_38994 Rhizophagus irregularis GLOINDRAFT_38994 I 0.000
HETIRDRAFT_245864 Heterobasidion irregulare HETIRDRAFT_245864 I 0.000
M378DRAFT_10526 Amanita muscaria M378DRAFT_10526 I 0.000
SCLCIDRAFT_1208446 Scleroderma citrinum SCLCIDRAFT_1208446 N 0.000
M404DRAFT_15475 Pisolithus tinctorius M404DRAFT_15475 N 0.000
gw1.1.790.1 Sporobolomyces roseus gw1.1.790.1 N 0.000
FOMPIDRAFT_1127908 Fomitopsis pinicola FOMPIDRAFT_1127908 N 0.000