OLONG_006424 (Oryza longistaminata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OLONG_006424 T124843_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFP5
M01851_2.00 		Arabidopsis thaliana
DSWTNNNN
NNNNAWSH		 PBM
Weirauch et al.(2014)
pTH7539 		0.766 0.696
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_006424-R1 C2H2 ZF 67 89

Links

Other C2H2 ZF family TFs
Other Oryza longistaminata TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI09G12050 Oryza rufipogon ORUFI09G12050 I 0.827
OS09G0431900 Oryza sativa OS09G0431900 I 0.827
LPERR09G07930 Leersia perrieri LPERR09G07930 I 0.827
ORGLA09G0084000 Oryza glaberrima ORGLA09G0084000 I 0.827
OPUNC09G09720 Oryza punctata OPUNC09G09720 I 0.827
OGLUM09G11630 Oryza glumaepatula OGLUM09G11630 I 0.827
OMERI09G08780 Oryza meridionalis OMERI09G08780 I 0.827
ONIVA09G10990 Oryza nivara ONIVA09G10990 I 0.827
Traes_5AL_81EFE5211 Triticum aestivum Traes_5AL_81EFE5211 I 0.827
Traes_5BL_3E6B0CD61 Triticum aestivum Traes_5BL_3E6B0CD61 I 0.827
OBART09G11250 Oryza barthii OBART09G11250 I 0.827
OB09G17800 Oryza brachyantha OB09G17800 I 0.827
BGIOSGA029710 Oryza indica BGIOSGA029710 I 0.827
MLOC_4507 Hordeum vulgare MLOC_4507 I 0.827
TRIUR3_22340 Triticum urartu TRIUR3_22340 I 0.827
Traes_5DL_B97546DA11 Triticum aestivum Traes_5DL_B97546DA11 I 0.827
gene05263-v1.0-hybrid Fragaria vesca gene05263-v1.0-hybrid I 0.815
Bo2g155500 Brassica oleracea Bo2g155500 N 0.802
Bostr.29827s0107 Boechera stricta Bostr.29827s0107 N 0.802
fgenesh2_kg.6__2677__AT5G27880.1 Arabidopsis lyrata fgenesh2_kg.6__2677__AT5G27880.1 N 0.802
Sb02g025390 Sorghum bicolor Sb02g025390 I 0.779
Pavir.J36164 Panicum virgatum Pavir.J36164 I 0.779
Pavir.Bb02239 Panicum virgatum Pavir.Bb02239 I 0.779
Si031489m.g Setaria italica Si031489m.g I 0.779
BRADI4G30920 Brachypodium distachyon BRADI4G30920 I 0.779
GRMZM2G108818 Zea mays GRMZM2G108818 I 0.779
GRMZM2G037574 Zea mays GRMZM2G037574 I 0.779
Si037914m.g Setaria italica Si037914m.g I 0.777
SELMODRAFT_450813 Selaginella moellendorffii SELMODRAFT_450813 I 0.777
SELMODRAFT_405785 Selaginella moellendorffii SELMODRAFT_405785 I 0.777
GRMZM2G161255 Zea mays GRMZM2G161255 I 0.777
Pavir.Ia03096 Panicum virgatum Pavir.Ia03096 I 0.777
Pavir.Ib01803 Panicum virgatum Pavir.Ib01803 I 0.777
GRMZM2G115388 Zea mays GRMZM2G115388 I 0.774
Sb01g034110 Sorghum bicolor Sb01g034110 I 0.774
GRMZM2G403590 Zea mays GRMZM2G403590 I 0.774
Pavir.Ia03263 Panicum virgatum Pavir.Ia03263 I 0.774
Pavir.Ib01788 Panicum virgatum Pavir.Ib01788 I 0.774
F775_01070 Aegilops tauschii F775_01070 I 0.769
SELMODRAFT_450839 Selaginella moellendorffii SELMODRAFT_450839 I 0.767
Traes_5DL_DD8A0F6BE Triticum aestivum Traes_5DL_DD8A0F6BE I 0.767
SELMODRAFT_450832 Selaginella moellendorffii SELMODRAFT_450832 I 0.767
BRADI4G37760 Brachypodium distachyon BRADI4G37760 I 0.767
F775_42450 Aegilops tauschii F775_42450 I 0.767
MDP0000121370 Malus domestica MDP0000121370 I 0.767
MDP0000165710 Malus domestica MDP0000165710 I 0.767
Bo9g011450 Brassica oleracea Bo9g011450 I 0.767
30045.m000471 Ricinus communis 30045.m000471 I 0.766
Ca_08116 Cicer arietinum Ca_08116 I 0.766
Thhalv10008773m.g Eutrema salsugineum Thhalv10008773m.g I 0.766
cassava44297.m1 Manihot esculenta cassava44297.m1 I 0.766
ZFP5 Arabidopsis thaliana AT1G10480 D 0.766
Pavir.Ha01090 Panicum virgatum Pavir.Ha01090 I 0.766
Carubv10003685m.g Capsella rubella Carubv10003685m.g I 0.766
Cagra.1504s0017 Capsella grandiflora Cagra.1504s0017 I 0.766
evm.TU.supercontig_51.84 Carica papaya evm.TU.supercontig_51.84 I 0.766
Bo8g109510 Brassica oleracea Bo8g109510 I 0.766
Bostr.13671s0437 Boechera stricta Bostr.13671s0437 I 0.766
VIT_08s0040g00750 Vitis vinifera VIT_08s0040g00750 I 0.766
Si028367m.g Setaria italica Si028367m.g I 0.766
Lus10017229.g Linum usitatissimum Lus10017229.g I 0.764
GIS2 Arabidopsis lyrata fgenesh2_kg.6__609__AT5G06650.1 I 0.764
orange1.1g046965m.g Citrus sinensis orange1.1g046965m.g I 0.764
Bo2g007320 Brassica oleracea Bo2g007320 I 0.764
gene05169-v1.0-hybrid Fragaria vesca gene05169-v1.0-hybrid I 0.764
evm.TU.supercontig_1307.1 Carica papaya evm.TU.supercontig_1307.1 I 0.764
PGSC0003DMG400011450 Solanum tuberosum PGSC0003DMG400011450 I 0.764
GIS2 Arabidopsis thaliana AT5G06650 I 0.764
GLYMA03G37610 Glycine max GLYMA03G37610 I 0.764
Thhalv10015891m.g Eutrema salsugineum Thhalv10015891m.g I 0.764
PK10012.1 Cannabis sativa PK10012.1 I 0.764
chr5.LjT04G07.90.nd Lotus japonicus chr5.LjT04G07.90.nd I 0.764
GRMZM2G703281 Zea mays GRMZM2G703281 I 0.764
LPERR08G07840 Leersia perrieri LPERR08G07840 I 0.764
GLYMA06G14783 Glycine max GLYMA06G14783 I 0.764
GLYMA19G40220 Glycine max GLYMA19G40220 I 0.764
Pavir.Ib01877 Panicum virgatum Pavir.Ib01877 I 0.764
Ciclev10003844m.g Citrus clementina Ciclev10003844m.g I 0.764
evm.TU.supercontig_116.88 Carica papaya evm.TU.supercontig_116.88 I 0.764
Bra028724 Brassica rapa Bra028724 I 0.764
TCM_044725 Theobroma cacao TCM_044725 I 0.764
cassava45710.m1 Manihot esculenta cassava45710.m1 I 0.764
Pm008291 Prunus mume Pm008291 I 0.764
Bra008787 Brassica rapa Bra008787 I 0.764
TRIUR3_34498 Triticum urartu TRIUR3_34498 I 0.764
Bo9g166240 Brassica oleracea Bo9g166240 I 0.764
Solyc10g078990.1 Solanum lycopersicum Solyc10g078990.1 I 0.764
Bostr.13129s0308 Boechera stricta Bostr.13129s0308 I 0.764
Bostr.2902s0137 Boechera stricta Bostr.2902s0137 I 0.764
AMTR_s00022p00165560 Amborella trichopoda AMTR_s00022p00165560 I 0.764
Carubv10002570m.g Capsella rubella Carubv10002570m.g I 0.764
Carubv10003820m.g Capsella rubella Carubv10003820m.g I 0.764
Carubv10018785m.g Capsella rubella Carubv10018785m.g I 0.764
Solyc10g078970.1 Solanum lycopersicum Solyc10g078970.1 I 0.764
Cagra.3166s0007 Capsella grandiflora Cagra.3166s0007 I 0.764
MLOC_38864 Hordeum vulgare MLOC_38864 N 0.761
TRIUR3_30765 Triticum urartu TRIUR3_30765 N 0.761
F775_05447 Aegilops tauschii F775_05447 N 0.761
MTR_2g067740 Medicago truncatula MTR_2g067740 N 0.757
Ca_23376 Cicer arietinum Ca_23376 N 0.757