CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_017398
(
Oryza longistaminata
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
OLONG_017398
T124853_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_017398-R1
C2H2 ZF
26
48
FVCEVCNKGFQRDQNLQLHRRGH
Links
Other
C2H2 ZF
family TFs
Other
Oryza longistaminata
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
mgf023939m
Mimulus guttatus
mgf023939m
N
0.827
Traes_4BL_C7F1E5ECA
Triticum aestivum
Traes_4BL_C7F1E5ECA
N
0.815
TRAES3BF231500020CFD_g
Triticum aestivum
TRAES3BF231500020CFD_g
N
0.815
TRIUR3_22849
Triticum urartu
TRIUR3_22849
N
0.815
TRIUR3_34542
Triticum urartu
TRIUR3_34542
N
0.815
Pavir.Ib03390
Panicum virgatum
Pavir.Ib03390
N
0.815
OMERI01G40020
Oryza meridionalis
OMERI01G40020
N
0.815
LjSGA_035034.1
Lotus japonicus
LjSGA_035034.1
N
0.815
SELMODRAFT_9108
Selaginella moellendorffii
SELMODRAFT_9108
N
0.815
LPERR01G37530
Leersia perrieri
LPERR01G37530
N
0.815
OLONG_014599
Oryza longistaminata
OLONG_014599
N
0.815
OLONG_003514
Oryza longistaminata
OLONG_003514
N
0.815
GSMUA_Achr7G24170_001
Musa acuminata
GSMUA_Achr7G24170_001
N
0.815
Bo2g120870
Brassica oleracea
Bo2g120870
N
0.779
PDK_20s1331901g003
Phoenix dactylifera
PDK_20s1331901g003
N
0.779
MDP0000501042
Malus domestica
MDP0000501042
N
0.776
Bra031820
Brassica rapa
Bra031820
N
0.776
MDP0000844509
Malus domestica
MDP0000844509
N
0.776
OLONG_008057
Oryza longistaminata
OLONG_008057
N
0.768
GLYMA01G27910
Glycine max
GLYMA01G27910
N
0.767
evm.TU.supercontig_216.26
Carica papaya
evm.TU.supercontig_216.26
N
0.767
SELMODRAFT_9114
Selaginella moellendorffii
SELMODRAFT_9114
N
0.767
SELMODRAFT_9104
Selaginella moellendorffii
SELMODRAFT_9104
N
0.767
GLYMA10G02501
Glycine max
GLYMA10G02501
N
0.756