CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI03G03770
(
Oryza meridionalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
OMERI03G03770
T124887_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI03G03770.1
C2H2 ZF
1377
1400
FQCDIEFCDMTFETKAELRAHQRN
OMERI03G03770.1
C2H2 ZF
1401
1424
ICTDESCGKRFSSHKYLKRHQCVH
OMERI03G03770.1
C2H2 ZF
1430
1454
FKCPWDGCPMTFKWLWAQTEHIRVH
OMERI03G03770.1
C2H2 ZF
1460
1486
YKCSAPDCGQSFRYVSDYSRHRKKFNH
OMERI03G03770.2
C2H2 ZF
1363
1386
FQCDIEFCDMTFETKAELRAHQRN
OMERI03G03770.2
C2H2 ZF
1387
1410
ICTDESCGKRFSSHKYLKRHQCVH
OMERI03G03770.2
C2H2 ZF
1416
1440
FKCPWDGCPMTFKWLWAQTEHIRVH
OMERI03G03770.2
C2H2 ZF
1446
1472
YKCSAPDCGQSFRYVSDYSRHRKKFNH
Links
Other
C2H2 ZF
family TFs
Other
Oryza meridionalis
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA03G03740
Oryza nivara
ONIVA03G03740
N
0.827
OPUNC03G03660
Oryza punctata
OPUNC03G03660
N
0.827
ORGLA03G0037300
Oryza glaberrima
ORGLA03G0037300
N
0.827
ORUFI03G03680
Oryza rufipogon
ORUFI03G03680
N
0.827
BGIOSGA011871
Oryza indica
BGIOSGA011871
N
0.827
OBART03G03980
Oryza barthii
OBART03G03980
N
0.827
OGLUM03G03870
Oryza glumaepatula
OGLUM03G03870
N
0.827
OLONG_008284
Oryza longistaminata
OLONG_008284
N
0.827
OB03G14030
Oryza brachyantha
OB03G14030
N
0.810
LPERR03G03610
Leersia perrieri
LPERR03G03610
N
0.800
Sb01g046870
Sorghum bicolor
Sb01g046870
N
0.799
TRIUR3_27468
Triticum urartu
TRIUR3_27468
N
0.792
Traes_4AL_24A54C8BA
Triticum aestivum
Traes_4AL_24A54C8BA
N
0.792