OMERI10G07530 (Oryza meridionalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OMERI10G07530 T124923_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
id1
M02672_2.00 		Zea mays
TBKYYBYTHBYG
CRVDARVRRMVA		 SELEX
Mathelier et al.(2014)
MA0120.1 		0.758 0.902
id1
M10380_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ID1_01 		0.758 0.902
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI10G07530.1 C2H2 ZF 189 210
OMERI10G07530.1 C2H2 ZF 211 235

Links

Other C2H2 ZF family TFs
Other Oryza meridionalis TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC10G08850 Oryza punctata OPUNC10G08850 N 0.797
ORGLA10G0088000 Oryza glaberrima ORGLA10G0088000 N 0.797
ORUFI10G10700 Oryza rufipogon ORUFI10G10700 N 0.797
OS10G0419200 Oryza sativa OS10G0419200 N 0.797
BGIOSGA031911 Oryza indica BGIOSGA031911 N 0.797
ONIVA10G09540 Oryza nivara ONIVA10G09540 N 0.797
OBART10G10130 Oryza barthii OBART10G10130 N 0.797
OGLUM10G10050 Oryza glumaepatula OGLUM10G10050 N 0.797
Si036003m.g Setaria italica Si036003m.g I 0.782
Sb01g021480 Sorghum bicolor Sb01g021480 I 0.782
BRADI3G26910 Brachypodium distachyon BRADI3G26910 N 0.773
LPERR10G07370 Leersia perrieri LPERR10G07370 N 0.767
LjSGA_017927.1 Lotus japonicus LjSGA_017927.1 I 0.761
id1 Zea mays GRMZM2G011357 D 0.758