ORGLA02G0229600 (Oryza glaberrima)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ORGLA02G0229600 T125078_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZAT4
M01168_2.00
Arabidopsis thaliana
NNHRSTN

NASYDNN
PBM
Lambert et al.(2019)
pTH11142
0.776 0.804
ZAT9
M06817_2.00
Arabidopsis thaliana
YTACTWHH

DDWAGTAR
Dap-seq
OMalley et al.(2016)
At3g60580_col_a
0.776 0.804
ZAT1
M01167_2.00
Arabidopsis thaliana
NHRCTNN

NNAGYDN
PBM
Lambert et al.(2019)
pTH10246
0.775 0.783
AZF2
M01854_2.00
Arabidopsis thaliana
NASTRNN

NNYASTN
PBM
Weirauch et al.(2014)
pTH8258
0.759 0.652
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA02G0229600.1 C2H2 ZF 200 222
ORGLA02G0229600.1 C2H2 ZF 264 286

Links

Other C2H2 ZF family TFs
Other Oryza glaberrima TFs

151 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OGLUM02G27190 Oryza glumaepatula OGLUM02G27190 I 0.827
ORUFI02G28150 Oryza rufipogon ORUFI02G28150 I 0.827
OMERI02G26030 Oryza meridionalis OMERI02G26030 I 0.827
ONIVA02G29150 Oryza nivara ONIVA02G29150 I 0.827
BGIOSGA008755 Oryza indica BGIOSGA008755 I 0.827
OBART02G26700 Oryza barthii OBART02G26700 I 0.827
OS02G0659500 Oryza sativa OS02G0659500 I 0.827
OMERI04G17450 Oryza meridionalis OMERI04G17450 I 0.817
OBART04G21020 Oryza barthii OBART04G21020 I 0.817
ONIVA04G19260 Oryza nivara ONIVA04G19260 I 0.817
OS04G0552700 Oryza sativa OS04G0552700 I 0.817
ORUFI04G22610 Oryza rufipogon ORUFI04G22610 I 0.817
BGIOSGA016894 Oryza indica BGIOSGA016894 I 0.817
OPUNC04G18700 Oryza punctata OPUNC04G18700 I 0.817
ORGLA04G0180800 Oryza glaberrima ORGLA04G0180800 I 0.817
OB04G28040 Oryza brachyantha OB04G28040 I 0.811
OLONG_016061 Oryza longistaminata OLONG_016061 I 0.811
GSMUA_Achr4G26920_001 Musa acuminata GSMUA_Achr4G26920_001 I 0.806
GSMUA_Achr1G01550_001 Musa acuminata GSMUA_Achr1G01550_001 I 0.806
GSMUA_Achr11G21040_001 Musa acuminata GSMUA_Achr11G21040_001 I 0.800
BRADI3G33100 Brachypodium distachyon BRADI3G33100 I 0.800
TRIUR3_29692 Triticum urartu TRIUR3_29692 I 0.796
GSMUA_Achr5G15450_001 Musa acuminata GSMUA_Achr5G15450_001 I 0.796
GRMZM2G170520 Zea mays GRMZM2G170520 I 0.793
Si010615m.g Setaria italica Si010615m.g I 0.793
GSMUA_AchrUn_randomG03030_001 Musa acuminata GSMUA_AchrUn_randomG03030_001 I 0.782
cassava19892.m1 Manihot esculenta cassava19892.m1 I 0.782
Lus10009278.g Linum usitatissimum Lus10009278.g I 0.782
POPTR_0002s14460 Populus trichocarpa POPTR_0002s14460 I 0.782
Pavir.Ab02618 Panicum virgatum Pavir.Ab02618 I 0.782
Lus10015888.g Linum usitatissimum Lus10015888.g I 0.782
GSMUA_Achr4G12160_001 Musa acuminata GSMUA_Achr4G12160_001 I 0.782
30174.m008818 Ricinus communis 30174.m008818 I 0.782
SapurV1A.0033s0440 Salix purpurea SapurV1A.0033s0440 I 0.781
Eucgr.K00165 Eucalyptus grandis Eucgr.K00165 I 0.781
Bo6g077190 Brassica oleracea Bo6g077190 I 0.776
Bo4g104940 Brassica oleracea Bo4g104940 I 0.776
Bo8g095300 Brassica oleracea Bo8g095300 I 0.776
Bra003422 Brassica rapa Bra003422 I 0.776
SapurV1A.0248s0230 Salix purpurea SapurV1A.0248s0230 I 0.776
ZAT9 Arabidopsis thaliana AT3G60580 D 0.776
scaffold_503291.1 Arabidopsis lyrata scaffold_503291.1 I 0.776
Gorai.001G175400 Gossypium raimondii Gorai.001G175400 I 0.776
evm.TU.supercontig_2070.1 Carica papaya evm.TU.supercontig_2070.1 I 0.776
ZAT4 Arabidopsis thaliana AT2G45120 D 0.776
Thhalv10006508m.g Eutrema salsugineum Thhalv10006508m.g I 0.776
Bra007545 Brassica rapa Bra007545 I 0.776
Bra014483 Brassica rapa Bra014483 I 0.776
Cagra.0239s0063 Capsella grandiflora Cagra.0239s0063 I 0.776
Bostr.13158s0058 Boechera stricta Bostr.13158s0058 I 0.776
Bostr.25993s0262 Boechera stricta Bostr.25993s0262 I 0.776
fgenesh2_kg.4__2705__AT2G45120.1 Arabidopsis lyrata fgenesh2_kg.4__2705__AT2G45120.1 I 0.776
VIT_15s0021g02720 Vitis vinifera VIT_15s0021g02720 I 0.776
Carubv10017660m.g Capsella rubella Carubv10017660m.g I 0.776
Cagra.6011s0004 Capsella grandiflora Cagra.6011s0004 I 0.776
Carubv10023569m.g Capsella rubella Carubv10023569m.g I 0.776
PGSC0003DMG400024550 Solanum tuberosum PGSC0003DMG400024550 I 0.775
Gorai.004G164000 Gossypium raimondii Gorai.004G164000 I 0.775
Bostr.5325s0123 Boechera stricta Bostr.5325s0123 I 0.775
Eucgr.D02497 Eucalyptus grandis Eucgr.D02497 I 0.775
ZAT1 Arabidopsis thaliana AT1G02030 D 0.775
Gorai.008G106500 Gossypium raimondii Gorai.008G106500 I 0.775
Solyc03g115450.1 Solanum lycopersicum Solyc03g115450.1 I 0.775
cassava14164.m1 Manihot esculenta cassava14164.m1 I 0.773
PGSC0003DMG400020929 Solanum tuberosum PGSC0003DMG400020929 I 0.770
mgf017082m Mimulus guttatus mgf017082m I 0.766
Ciclev10020499m.g Citrus clementina Ciclev10020499m.g I 0.766
MTR_4g027440 Medicago truncatula MTR_4g027440 I 0.766
mgf021094m Mimulus guttatus mgf021094m I 0.766
MTR_0160s0030 Medicago truncatula MTR_0160s0030 I 0.766
GLYMA01G32981 Glycine max GLYMA01G32981 I 0.766
GLYMA01G18606 Glycine max GLYMA01G18606 I 0.766
orange1.1g044606m.g Citrus sinensis orange1.1g044606m.g I 0.766
GLYMA03G03950 Glycine max GLYMA03G03950 I 0.766
Ca_23672 Cicer arietinum Ca_23672 I 0.766
Eucgr.F02262 Eucalyptus grandis Eucgr.F02262 I 0.764
Thhalv10009894m.g Eutrema salsugineum Thhalv10009894m.g I 0.762
30170.m013751 Ricinus communis 30170.m013751 I 0.760
POPTR_0002s12010 Populus trichocarpa POPTR_0002s12010 I 0.760
29661.m000908 Ricinus communis 29661.m000908 I 0.760
VIT_07s0129g00240 Vitis vinifera VIT_07s0129g00240 I 0.760
VIT_03s0091g00690 Vitis vinifera VIT_03s0091g00690 I 0.760
Solyc12g088390.1 Solanum lycopersicum Solyc12g088390.1 I 0.760
MTR_1g018420 Medicago truncatula MTR_1g018420 I 0.760
mgf006006m Mimulus guttatus mgf006006m I 0.760
cassava12475.valid.m1 Manihot esculenta cassava12475.valid.m1 I 0.760
AZF2 Arabidopsis thaliana AT3G19580 D 0.759
SapurV1A.0845s0100 Salix purpurea SapurV1A.0845s0100 I 0.759
AZF2 Arabidopsis lyrata fgenesh2_kg.3__2173__AT3G19580.2 I 0.759
PK10188.1 Cannabis sativa PK10188.1 I 0.759
chr5.CM0096.480.nc Lotus japonicus chr5.CM0096.480.nc I 0.759
Eucgr.G01247 Eucalyptus grandis Eucgr.G01247 I 0.759
chr5.CM0200.550.nc Lotus japonicus chr5.CM0200.550.nc I 0.759
evm.TU.supercontig_249.7 Carica papaya evm.TU.supercontig_249.7 I 0.759
gene02558-v1.0-hybrid Fragaria vesca gene02558-v1.0-hybrid I 0.759
Thhalv10021307m.g Eutrema salsugineum Thhalv10021307m.g I 0.759
Gorai.008G020700 Gossypium raimondii Gorai.008G020700 I 0.759
Gorai.002G132600 Gossypium raimondii Gorai.002G132600 I 0.759
Gorai.010G025200 Gossypium raimondii Gorai.010G025200 I 0.759
orange1.1g024499m.g Citrus sinensis orange1.1g024499m.g I 0.759
MDP0000762756 Malus domestica MDP0000762756 I 0.759
MDP0000573176 Malus domestica MDP0000573176 I 0.759
Bo5g113850 Brassica oleracea Bo5g113850 I 0.759
orange1.1g038669m.g Citrus sinensis orange1.1g038669m.g I 0.759
Bra022436 Brassica rapa Bra022436 I 0.759
SapurV1A.0019s0280 Salix purpurea SapurV1A.0019s0280 I 0.759
MDP0000319225 Malus domestica MDP0000319225 I 0.759
MDP0000198015 Malus domestica MDP0000198015 I 0.759
SapurV1A.0005s0440 Salix purpurea SapurV1A.0005s0440 I 0.759
Bo1g113530 Brassica oleracea Bo1g113530 I 0.759
Gorai.013G050100 Gossypium raimondii Gorai.013G050100 I 0.759
BRADI1G14750 Brachypodium distachyon BRADI1G14750 I 0.759
GLYMA04G04760 Glycine max GLYMA04G04760 I 0.759
Bra038219 Brassica rapa Bra038219 I 0.759
BRADI4G03410 Brachypodium distachyon BRADI4G03410 I 0.759
MLOC_51405 Hordeum vulgare MLOC_51405 I 0.759
TCM_007214 Theobroma cacao TCM_007214 I 0.759
OPUNC12G15600 Oryza punctata OPUNC12G15600 I 0.759
Si023013m.g Setaria italica Si023013m.g I 0.759
TCM_034720 Theobroma cacao TCM_034720 I 0.759
Traes_4BS_FE945D2FC Triticum aestivum Traes_4BS_FE945D2FC I 0.759
VIT_18s0001g09230 Vitis vinifera VIT_18s0001g09230 I 0.759
MTR_3g102980 Medicago truncatula MTR_3g102980 I 0.759
OS12G0583700 Oryza sativa OS12G0583700 I 0.759
PGSC0003DMG400002383 Solanum tuberosum PGSC0003DMG400002383 I 0.759
PGSC0003DMG400011548 Solanum tuberosum PGSC0003DMG400011548 I 0.759
PGSC0003DMG400041467 Solanum tuberosum PGSC0003DMG400041467 I 0.759
PGSC0003DMG400028275 Solanum tuberosum PGSC0003DMG400028275 I 0.759
POPTR_0009s09250 Populus trichocarpa POPTR_0009s09250 I 0.759
POPTR_0014s01760 Populus trichocarpa POPTR_0014s01760 I 0.759
PRUPE_ppa011060mg Prunus persica PRUPE_ppa011060mg I 0.759
PRUPE_ppa009924mg Prunus persica PRUPE_ppa009924mg I 0.759
Ca_01586 Cicer arietinum Ca_01586 I 0.759
Ca_05641 Cicer arietinum Ca_05641 I 0.759
Cagra.6943s0031 Capsella grandiflora Cagra.6943s0031 I 0.759
GLYMA14G09760 Glycine max GLYMA14G09760 I 0.759
GLYMA17G35430 Glycine max GLYMA17G35430 I 0.759
Carubv10014391m.g Capsella rubella Carubv10014391m.g I 0.759
GLYMA10G40400 Glycine max GLYMA10G40400 I 0.759
Ciclev10002297m.g Citrus clementina Ciclev10002297m.g I 0.759
GLYMA06G04840 Glycine max GLYMA06G04840 I 0.759
MLOC_54674 Hordeum vulgare MLOC_54674 I 0.759
Bostr.19424s0704 Boechera stricta Bostr.19424s0704 I 0.759
Pm021284 Prunus mume Pm021284 I 0.759
Pm005390 Prunus mume Pm005390 I 0.759
Ca_18364 Cicer arietinum Ca_18364 I 0.759
28152.m000908 Ricinus communis 28152.m000908 I 0.759
MTR_1g106730 Medicago truncatula MTR_1g106730 I 0.759
cassava43667.valid.m1 Manihot esculenta cassava43667.valid.m1 I 0.759
cassava35732.valid.m1 Manihot esculenta cassava35732.valid.m1 I 0.759
Ciclev10029065m.g Citrus clementina Ciclev10029065m.g I 0.759