CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS01G0195000
(
Oryza sativa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
OS01G0195000
T125194_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IDD5
M06807_2.00
Arabidopsis thaliana
DNTTTTGTCKTTTTSYD
HRSAAAAMGACAAAANH
Dap-seq
OMalley et al.(2016)
IDD5_colamp_a
0.764
0.930
IDD5
M06808_2.00
Arabidopsis thaliana
WTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAW
Dap-seq
OMalley et al.(2016)
IDD5_col
0.764
0.930
AT1G14580
M06797_2.00
Arabidopsis thaliana
NNNWWTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAWWNNN
Dap-seq
OMalley et al.(2016)
At1g14580_col_a
0.764
0.884
AT1G14580
M06798_2.00
Arabidopsis thaliana
NNTTTTGTCKTTTWSYD
HRSWAAAMGACAAAANN
Dap-seq
OMalley et al.(2016)
At1g14580_colamp_a
0.764
0.884
IDD1
M06824_2.00
Arabidopsis thaliana
DNTTTTGTCKTTTWBYD
HRVWAAAMGACAAAANH
Dap-seq
OMalley et al.(2016)
At5g66730_colamp_a
0.759
0.884
IDD1
M06825_2.00
Arabidopsis thaliana
WDTTTTGTCKTTTWNYD
HRNWAAAMGACAAAAHW
Dap-seq
OMalley et al.(2016)
At5g66730_col
0.759
0.884
IDD4
M06809_2.00
Arabidopsis thaliana
WWTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAWW
Dap-seq
OMalley et al.(2016)
IDD4_col_a
0.759
0.860
IDD7
M06803_2.00
Arabidopsis thaliana
NDDTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAHHN
Dap-seq
OMalley et al.(2016)
IDD7_col_a
0.759
0.860
MGP
M06795_2.00
Arabidopsis thaliana
HNHDWTTTTGTCKTTTWNYD
HRNWAAAMGACAAAAWHDND
Dap-seq
OMalley et al.(2016)
MGP_col_a
0.759
0.860
MGP
M06796_2.00
Arabidopsis thaliana
NNDTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAHNN
Dap-seq
OMalley et al.(2016)
MGP_colamp_a
0.759
0.860
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS01T0195000-01
C2H2 ZF
151
172
WKCDKCSKRYAVHSDWKAHSKV
OS01T0195000-01
C2H2 ZF
171
197
KVCGTREYRCDCGTLFSRRDSFITHRA
Links
Other
C2H2 ZF
family TFs
Other
Oryza sativa
TFs
472 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_188638
Agaricus bisporus
AGABI2DRAFT_188638
N
0.000
BN946_scf185015.g92
Trametes cinnabarina
BN946_scf185015.g92
N
0.000
CC1G_01334
Coprinopsis cinerea
CC1G_01334
N
0.000
CERSUDRAFT_111079
Ceriporiopsis subvermispora
CERSUDRAFT_111079
N
0.000
CY34DRAFT_800204
Suillus luteus
CY34DRAFT_800204
N
0.000
DICSQDRAFT_161203
Dichomitus squalens
DICSQDRAFT_161203
N
0.000
fgenesh2_pg.C_scaffold_4000344
Heterobasidion annosum
fgenesh2_pg.C_scaffold_4000344
N
0.000
FIBRA_08488
Fibroporia radiculosa
FIBRA_08488
N
0.000
FOMPIDRAFT_1025562
Fomitopsis pinicola
FOMPIDRAFT_1025562
N
0.000
GALMADRAFT_236555
Galerina marginata
GALMADRAFT_236555
N
0.000
GLOTRDRAFT_70334
Gloeophyllum trabeum
GLOTRDRAFT_70334
N
0.000
HETIRDRAFT_237963
Heterobasidion irregulare
HETIRDRAFT_237963
N
0.000
JAAARDRAFT_116407
Jaapia argillacea
JAAARDRAFT_116407
N
0.000
K443DRAFT_675725
Laccaria amethystina
K443DRAFT_675725
N
0.000
LACBIDRAFT_311571
Laccaria bicolor
LACBIDRAFT_311571
N
0.000
M378DRAFT_156363
Amanita muscaria
M378DRAFT_156363
N
0.000
M404DRAFT_124276
Pisolithus tinctorius
M404DRAFT_124276
N
0.000
M408DRAFT_308571
Serendipita vermifera
M408DRAFT_308571
N
0.000
M408DRAFT_74753
Serendipita vermifera
M408DRAFT_74753
N
0.000
M413DRAFT_65005
Hebeloma cylindrosporum
M413DRAFT_65005
N
0.000
Moror_13892
Moniliophthora roreri
Moror_13892
N
0.000
PAXRUDRAFT_129737
Paxillus rubicundulus
PAXRUDRAFT_129737
N
0.000
PHACADRAFT_249698
Phanerochaete carnosa
PHACADRAFT_249698
N
0.000
PHLGIDRAFT_81249
Phlebiopsis gigantea
PHLGIDRAFT_81249
N
0.000
PIIN_05647
Piriformospora indica
PIIN_05647
N
0.000
PILCRDRAFT_32440
Piloderma croceum
PILCRDRAFT_32440
N
0.000
PLEOSDRAFT_27233
Pleurotus ostreatus
PLEOSDRAFT_27233
N
0.000
SCHCODRAFT_255141
Schizophyllum commune
SCHCODRAFT_255141
N
0.000
SCLCIDRAFT_1209153
Scleroderma citrinum
SCLCIDRAFT_1209153
N
0.000
SERLA73DRAFT_177720
Serpula lacrymans
SERLA73DRAFT_177720
N
0.000