PAN0_051c6441 (Pseudozyma antarctica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PAN0_051c6441 T125375_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
cre-1
M01198_2.00
Neurospora crassa
CCCCRNNN

NNNYGGGG
PBM
Lambert et al.(2019)
pTH8711
0.797 0.826
RO3G_16591
M01442_2.00
Rhizopus oryzae
NCCCCRCDNN

NNHGYGGGGN
PBM
Najafabadi et al.(2015a)
pTH10231
0.796 0.870
MIG1
M00026_2.00
Saccharomyces cerevisiae
HCCCCRCN

NGYGGGGD
PBM
Badis et al.(2008)
MIG1_2106
0.758 0.761
MIG1
M01532_2.00
Saccharomyces cerevisiae
NCYCCRBNNN

NNNVYGGRGN
PBM
Zhu et al.(2009)
Mig1
0.758 0.761
MIG1
M07456_2.00
Saccharomyces cerevisiae
NCCCCRS

SYGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0337.1
0.758 0.761
MIG1
M08523_2.00
Saccharomyces cerevisiae
NCCCCRS

SYGGGGN
Misc
DeBoer et al.(2011)
YGL035C_555
0.758 0.761
MIG1
M08524_2.00
Saccharomyces cerevisiae
CCCCRSWWWW

WWWWSYGGGG
Misc
DeBoer et al.(2011)
YGL035C_654
0.758 0.761
MIG1
M10391_2.00
Saccharomyces cerevisiae
NHCCCCRSDTWWWWDDM

KHHWWWWAHSYGGGGDN
Transfac
Matys et al.(2006)
F$MIG1_01
0.758 0.761
MIG1
M10392_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MIG1_03
0.758 0.761
MIG1
M10393_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MIG1_Q6
0.758 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GAK68205 C2H2 ZF 243 265
GAK68205 C2H2 ZF 271 295

Links

Other C2H2 ZF family TFs
Other Pseudozyma antarctica TFs

280 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMXG00000002103 Astyanax mexicanus ENSAMXG00000002103 N 0.000
mycn Danio rerio ENSDARG00000006837 N 0.000
mycn Gasterosteus aculeatus ENSGACG00000009241 N 0.000
ENSONIG00000014735 Oreochromis niloticus ENSONIG00000014735 N 0.000
mycn Oryzias latipes ENSORLG00000013034 N 0.000
ENSPFOG00000019393 Poecilia formosa ENSPFOG00000019393 N 0.000
mycn Takifugu rubripes ENSTRUG00000007239 N 0.000
mycn Tetraodon nigroviridis ENSTNIG00000012294 N 0.000
ENSXMAG00000003386 Xiphophorus maculatus ENSXMAG00000003386 N 0.000