CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PAS_chr4_0487
(
Komagataella pastoris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PAS_chr4_0487
T125401_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ADR1
M00021_2.00
Saccharomyces cerevisiae
NACCCCRCHN
NDGYGGGGTN
PBM
Badis et al.(2008)
ADR1_4492
0.766
0.783
ADR1
M07451_2.00
Saccharomyces cerevisiae
NCCCCRM
KYGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0268.1
0.766
0.783
ADR1
M08517_2.00
Saccharomyces cerevisiae
NCCCCRM
KYGGGGN
Misc
DeBoer et al.(2011)
YDR216W_576
0.766
0.783
ADR1
M10388_2.00
Saccharomyces cerevisiae
MCYCCD
HGGRGK
Transfac
Matys et al.(2006)
F$ADR1_01
0.766
0.783
ADR1
M10389_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ADR1_Q6
0.766
0.783
rst2
M01186_2.00
Schizosaccharomyces pombe
NNCCCCDCNN
NNGHGGGGNN
PBM
Lambert et al.(2019)
pTH11144
0.757
0.783
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAY71743
C2H2 ZF
40
62
FVCQTCTRAFARQEHLKRHERSH
CAY71743
C2H2 ZF
68
91
FSCGICSRKFSRRDLLLRHAQKLH
Links
Other
C2H2 ZF
family TFs
Other
Komagataella pastoris
TFs
149 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy