PAS_chr4_0487 (Komagataella pastoris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PAS_chr4_0487 T125401_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ADR1
M00021_2.00
Saccharomyces cerevisiae
NACCCCRCHN

NDGYGGGGTN
PBM
Badis et al.(2008)
ADR1_4492
0.766 0.783
ADR1
M07451_2.00
Saccharomyces cerevisiae
NCCCCRM

KYGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0268.1
0.766 0.783
ADR1
M08517_2.00
Saccharomyces cerevisiae
NCCCCRM

KYGGGGN
Misc
DeBoer et al.(2011)
YDR216W_576
0.766 0.783
ADR1
M10388_2.00
Saccharomyces cerevisiae
MCYCCD

HGGRGK
Transfac
Matys et al.(2006)
F$ADR1_01
0.766 0.783
ADR1
M10389_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ADR1_Q6
0.766 0.783
rst2
M01186_2.00
Schizosaccharomyces pombe
NNCCCCDCNN

NNGHGGGGNN
PBM
Lambert et al.(2019)
pTH11144
0.757 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAY71743 C2H2 ZF 40 62
CAY71743 C2H2 ZF 68 91

Links

Other C2H2 ZF family TFs
Other Komagataella pastoris TFs

Invalid Input OrderBy

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action