PGSC0003DMG400003459 (Solanum tuberosum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PGSC0003DMG400003459 T125798_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400008898 C2H2 ZF 237 259
PGSC0003DMT400008898 C2H2 ZF 260 289

Links

Other C2H2 ZF family TFs
Other Solanum tuberosum TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc04g056320.1 Solanum lycopersicum Solyc04g056320.1 N 0.827
Eucgr.C01587 Eucalyptus grandis Eucgr.C01587 N 0.822
PK13355.1 Cannabis sativa PK13355.1 N 0.806
VIT_07s0141g00020 Vitis vinifera VIT_07s0141g00020 N 0.802
cassava31173.valid.m1 Manihot esculenta cassava31173.valid.m1 N 0.792
mgf016737m Mimulus guttatus mgf016737m N 0.792
evm.TU.supercontig_752.2 Carica papaya evm.TU.supercontig_752.2 N 0.792
SapurV1A.0403s0250 Salix purpurea SapurV1A.0403s0250 N 0.783
LPERR02G17380 Leersia perrieri LPERR02G17380 N 0.783
Eucgr.C01586 Eucalyptus grandis Eucgr.C01586 N 0.774
Cla014357 Citrullus lanatus Cla014357 N 0.768
Cucsa.104330 Cucumis sativus Cucsa.104330 N 0.768
GSMUA_Achr10G30400_001 Musa acuminata GSMUA_Achr10G30400_001 N 0.763
28161.m000228 Ricinus communis 28161.m000228 N 0.762
Pavir.J13034 Panicum virgatum Pavir.J13034 N 0.759
Pavir.J32778 Panicum virgatum Pavir.J32778 N 0.759
Sb04g023670 Sorghum bicolor Sb04g023670 N 0.759
OGLUM02G21630 Oryza glumaepatula OGLUM02G21630 N 0.759
OLONG_009376 Oryza longistaminata OLONG_009376 N 0.759
OBART02G21440 Oryza barthii OBART02G21440 N 0.759
OB02G28900 Oryza brachyantha OB02G28900 N 0.759
GRMZM2G023988 Zea mays GRMZM2G023988 N 0.759
MLOC_19108 Hordeum vulgare MLOC_19108 N 0.759
OMERI02G21010 Oryza meridionalis OMERI02G21010 N 0.759
ONIVA02G23610 Oryza nivara ONIVA02G23610 N 0.759
OS02G0572900 Oryza sativa OS02G0572900 N 0.759
BGIOSGA006205 Oryza indica BGIOSGA006205 N 0.759
ORUFI02G22530 Oryza rufipogon ORUFI02G22530 N 0.759
ORGLA02G0184700 Oryza glaberrima ORGLA02G0184700 N 0.759
OPUNC02G19290 Oryza punctata OPUNC02G19290 N 0.759
Si017455m.g Setaria italica Si017455m.g N 0.759