PGSC0003DMG400015498 (Solanum tuberosum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PGSC0003DMG400015498 T125820_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IDD1
M06824_2.00
Arabidopsis thaliana
DNTTTTGTCKTTTWBYD

HRVWAAAMGACAAAANH
Dap-seq
OMalley et al.(2016)
At5g66730_colamp_a
0.798 0.902
IDD1
M06825_2.00
Arabidopsis thaliana
WDTTTTGTCKTTTWNYD

HRNWAAAMGACAAAAHW
Dap-seq
OMalley et al.(2016)
At5g66730_col
0.798 0.902
IDD5
M06807_2.00
Arabidopsis thaliana
DNTTTTGTCKTTTTSYD

HRSAAAAMGACAAAANH
Dap-seq
OMalley et al.(2016)
IDD5_colamp_a
0.794 0.878
IDD5
M06808_2.00
Arabidopsis thaliana
WTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAW
Dap-seq
OMalley et al.(2016)
IDD5_col
0.794 0.878
AT1G14580
M06797_2.00
Arabidopsis thaliana
NNNWWTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAWWNNN
Dap-seq
OMalley et al.(2016)
At1g14580_col_a
0.794 0.854
AT1G14580
M06798_2.00
Arabidopsis thaliana
NNTTTTGTCKTTTWSYD

HRSWAAAMGACAAAANN
Dap-seq
OMalley et al.(2016)
At1g14580_colamp_a
0.794 0.854
IDD7
M06803_2.00
Arabidopsis thaliana
NDDTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAHHN
Dap-seq
OMalley et al.(2016)
IDD7_col_a
0.788 0.878
IDD4
M06809_2.00
Arabidopsis thaliana
WWTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAWW
Dap-seq
OMalley et al.(2016)
IDD4_col_a
0.788 0.829
MGP
M06795_2.00
Arabidopsis thaliana
HNHDWTTTTGTCKTTTWNYD

HRNWAAAMGACAAAAWHDND
Dap-seq
OMalley et al.(2016)
MGP_col_a
0.788 0.829
MGP
M06796_2.00
Arabidopsis thaliana
NNDTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAHNN
Dap-seq
OMalley et al.(2016)
MGP_colamp_a
0.788 0.829
NUC
M06822_2.00
Arabidopsis thaliana
NNNNNTTTTGTCKTYTWBYD

HRVWARAMGACAAAANNNNN
Dap-seq
OMalley et al.(2016)
NUC_col_a
0.765 0.805
NUC
M06823_2.00
Arabidopsis thaliana
NDTTTTGTCGTYTWNYD

HRNWARACGACAAAAHN
Dap-seq
OMalley et al.(2016)
NUC_colamp_a
0.765 0.805
JKD
M06818_2.00
Arabidopsis thaliana
HHNWWTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAWWNDD
Dap-seq
OMalley et al.(2016)
JKD_col_a
0.759 0.854
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400040063 C2H2 ZF 132 153
PGSC0003DMT400040063 C2H2 ZF 154 178
PGSC0003DMT400040064 C2H2 ZF 132 153
PGSC0003DMT400040064 C2H2 ZF 154 178

Links

Other C2H2 ZF family TFs
Other Solanum tuberosum TFs

661 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Poxm Drosophila melanogaster FBgn0003129 D 0.000
PAX1 Homo sapiens ENSG00000125813 D 0.000
PAX9 Homo sapiens ENSG00000198807 D 0.000
pax9 Danio rerio ENSDARG00000053829 D 0.000
estExt_fgenesh2_pg.C_420056 Branchiostoma floridae estExt_fgenesh2_pg.C_420056 I 0.000
pax-1 Caenorhabditis elegans WBGene00003937 I 0.000
TC008838 Tribolium castaneum TC008838 I 0.000
SPU_014539 Strongylocentrotus purpuratus SPU_014539 I 0.000
SPU_006683 Strongylocentrotus purpuratus SPU_006683 I 0.000
SMAR007866 Strigamia maritima SMAR007866 I 0.000
SINV15629 Solenopsis invicta SINV15629 I 0.000
RPRC009438 Rhodnius prolixus RPRC009438 I 0.000
PHUM515110 Pediculus humanus PHUM515110 I 0.000
NV11293 Nasonia vitripennis NV11293 I 0.000
MESCA000247 Megaselia scalaris MESCA000247 I 0.000
YQE_12494 Dendroctonus ponderosae YQE_12494 I 0.000
Aan_R005718 Calypte anna Aan_R005718 I 0.000
Pvit_17942 Pogona vitticeps Pvit_17942 I 0.000
Ogr19508 Ophisaurus gracilis Ogr19508 I 0.000
Ogr18451 Ophisaurus gracilis Ogr18451 I 0.000
Gfo_R012945 Geospiza fortis Gfo_R012945 I 0.000
ENSP00000384817-D1 Bos grunniens ENSP00000384817-D1 I 0.000
ENSP00000381499 Macaca fascicularis ENSP00000381499 I 0.000
ENSP00000355245 Macaca fascicularis ENSP00000355245 I 0.000
ENSBTAP00000008861-D1 Bos grunniens ENSBTAP00000008861-D1 I 0.000
Cmyd_10010133 Chelonia mydas Cmyd_10010133 I 0.000
Cflo_08772--XP_001121954.1_APIME Camponotus floridanus Cflo_08772--XP_001121954.1_APIME I 0.000
Alligator_sinensis_CCG004503.1 Alligator sinensis Alligator_sinensis_CCG004503.1 I 0.000
Afo_R004464 Aptenodytes forsteri Afo_R004464 I 0.000
LotgiG161614 Lottia gigantea LotgiG161614 I 0.000
KGM_09724 Danaus plexippus KGM_09724 I 0.000
ENSXMAG00000015762 Xiphophorus maculatus ENSXMAG00000015762 I 0.000
PAX5 Tursiops truncatus ENSTTRG00000006049 I 0.000
PAX1 Tursiops truncatus ENSTTRG00000002444 I 0.000
ENSTSYG00000008085 Tarsius syrichta ENSTSYG00000008085 I 0.000
pax9 Takifugu rubripes ENSTRUG00000011965 I 0.000
pax1a Takifugu rubripes ENSTRUG00000008079 I 0.000
pax9 Tetraodon nigroviridis ENSTNIG00000019284 I 0.000
pax1a Tetraodon nigroviridis ENSTNIG00000016891 I 0.000
ENSTNIG00000002104 Tetraodon nigroviridis ENSTNIG00000002104 I 0.000
PAX9 Taeniopygia guttata ENSTGUG00000012015 I 0.000
ENSTGUG00000007526 Taeniopygia guttata ENSTGUG00000007526 I 0.000
PAX5 Tupaia belangeri ENSTBEG00000007983 I 0.000
ENSXMAG00000019114 Xiphophorus maculatus ENSXMAG00000019114 I 0.000
ISCW011634 Ixodes scapularis ISCW011634 I 0.000
GA21910 Drosophila pseudoobscura FBgn0081895 I 0.000
HMEL004481 Heliconius melpomene HMEL004481 I 0.000
HelroG89496 Helobdella robusta HelroG89496 I 0.000
GB52620 Apis mellifera GB52620 I 0.000
GE24855 Drosophila yakuba FBgn0241954 I 0.000
GK14101 Drosophila willistoni FBgn0216107 I 0.000
GJ22751 Drosophila virilis FBgn0209855 I 0.000
GM26349 Drosophila sechellia FBgn0181202 I 0.000
GL24118 Drosophila persimilis FBgn0161708 I 0.000
GI22750 Drosophila mojavensis FBgn0145477 I 0.000
GH17421 Drosophila grimshawi FBgn0124891 I 0.000
GG17455 Drosophila erecta FBgn0109681 I 0.000
GF16668 Drosophila ananassae FBgn0093689 I 0.000
PAX9 Tupaia belangeri ENSTBEG00000002460 I 0.000
TMUE_s0003015350 Trichuris muris TMUE_s0003015350 I 0.000
L889_g19368 Steinernema feltiae L889_g19368 I 0.000
L596_g23601 Steinernema carpocapsae L596_g23601 I 0.000
HPLM_0000508801 Haemonchus placei HPLM_0000508801 I 0.000
EVEC_0000163101 Enterobius vermicularis EVEC_0000163101 I 0.000
DICVIV_10778 Dictyocaulus viviparus DICVIV_10778 I 0.000
D917_06071 Trichinella nativa D917_06071 I 0.000
ASU_08322 Ascaris suum ASU_08322 I 0.000
ASIM_0001701001 Anisakis simplex ASIM_0001701001 I 0.000
ANCCEY_02265 Ancylostoma ceylanicum ANCCEY_02265 I 0.000
ANCCAN_01783 Ancylostoma caninum ANCCAN_01783 I 0.000
ALUE_0000964501 Ascaris lumbricoides ALUE_0000964501 I 0.000
ACOC_0000962101 Angiostrongylus costaricensis ACOC_0000962101 I 0.000
L892_g31296 Steinernema scapterisci L892_g31296 I 0.000
L893_g11572 Steinernema glaseri L893_g11572 I 0.000
TELCIR_14257 Teladorsagia circumcincta TELCIR_14257 I 0.000
TCNE_0001785701 Toxocara canis TCNE_0001785701 I 0.000
SVUK_0000340101 Strongylus vulgaris SVUK_0000340101 I 0.000
SVE_0281100 Strongyloides venezuelensis SVE_0281100 I 0.000
SSTP_0000083300 Strongyloides stercoralis SSTP_0000083300 I 0.000
SPAL_0000396700 Strongyloides papillosus SPAL_0000396700 I 0.000
SMUV_0000337801 Syphacia muris SMUV_0000337801 I 0.000
SBAD_0000488901 Soboliphyme baturini SBAD_0000488901 I 0.000
PEQ_0000430901 Parascaris equorum PEQ_0000430901 I 0.000
NECAME_07382 Necator americanus NECAME_07382 I 0.000
NBR_0002110501 Nippostrongylus brasiliensis NBR_0002110501 I 0.000
L893_g8856 Steinernema glaseri L893_g8856 I 0.000
ACAC_0001249001 Angiostrongylus cantonensis ACAC_0001249001 I 0.000
PPAI009002 Phlebotomus papatasi PPAI009002 I 0.000
ACUA000500 Anopheles culicifacies ACUA000500 I 0.000
AATE019429 Anopheles atroparvus AATE019429 I 0.000
AARA001070 Anopheles arabiensis AARA001070 I 0.000
AALB006349 Anopheles albimanus AALB006349 I 0.000
pax1.S Xenopus laevis XB-GENE-865751 I 0.000
pax9.L Xenopus laevis XB-GENE-864845 I 0.000
pax1 Xenopus tropicalis XB-GENE-487951 I 0.000
pax9 Xenopus tropicalis XB-GENE-482238 I 0.000
LCUP007799 Lucilia cuprina LCUP007799 I 0.000
HHAL005838-PA Halyomorpha halys HHAL005838-PA I 0.000
CLEC012019 Cimex lectularius CLEC012019 I 0.000
Sakowv30044183m.g Saccoglossus kowalevskii Sakowv30044183m.g I 0.000
ADIR000995 Anopheles dirus ADIR000995 I 0.000
AEPI005638 Anopheles epiroticus AEPI005638 I 0.000
MDOA001030 Musca domestica MDOA001030 I 0.000
LLOJ004808 Lutzomyia longipalpis LLOJ004808 I 0.000
BGLB008429 Biomphalaria glabrata BGLB008429 I 0.000
ASTEI07741 Anopheles stephensi ASTEI07741 I 0.000
ASIS022893 Anopheles sinensis ASIS022893 I 0.000
AQUA002471 Anopheles quadriannulatus AQUA002471 I 0.000
AMIN005066 Anopheles minimus AMIN005066 I 0.000
AMEM000130 Anopheles merus AMEM000130 I 0.000
AMEC017516 Anopheles melas AMEC017516 I 0.000
AMAM000649 Anopheles maculatus AMAM000649 I 0.000
AFUN001734 Anopheles funestus AFUN001734 I 0.000
AFAF006072 Anopheles farauti AFAF006072 I 0.000
Ocbimv22007526m.g Octopus bimaculoides Ocbimv22007526m.g I 0.000
PAX1 Loxodonta africana ENSLAFG00000008908 I 0.000
PAX9 Echinops telfairi ENSETEG00000002086 I 0.000
PAX1 Erinaceus europaeus ENSEEUG00000007846 I 0.000
PAX9 Equus caballus ENSECAG00000023712 I 0.000
Pax1 Dipodomys ordii ENSDORG00000016051 I 0.000
PAX1 Dasypus novemcinctus ENSDNOG00000033546 I 0.000
PAX9 Dasypus novemcinctus ENSDNOG00000000352 I 0.000
pax1b Danio rerio ENSDARG00000073814 I 0.000
pax1a Danio rerio ENSDARG00000008203 I 0.000
ENSCSAVG00000007806 Ciona savignyi ENSCSAVG00000007806 I 0.000
ENSCSAG00000015463 Chlorocebus sabaeus ENSCSAG00000015463 I 0.000
ENSCSAG00000011068 Chlorocebus sabaeus ENSCSAG00000011068 I 0.000
PAX9 Cavia porcellus ENSCPOG00000010951 I 0.000
ENSFALG00000006155 Ficedula albicollis ENSFALG00000006155 I 0.000
PAX9 Felis catus ENSFCAG00000001024 I 0.000
ENSLACG00000015921 Latimeria chalumnae ENSLACG00000015921 I 0.000
ENSLACG00000009610 Latimeria chalumnae ENSLACG00000009610 I 0.000
ENSGMOG00000018913 Gadus morhua ENSGMOG00000018913 I 0.000
ENSGMOG00000017053 Gadus morhua ENSGMOG00000017053 I 0.000
ENSGMOG00000009128 Gadus morhua ENSGMOG00000009128 I 0.000
PAX1 Gorilla gorilla ENSGGOG00000016075 I 0.000
PAX9 Gorilla gorilla ENSGGOG00000001528 I 0.000
ENSGALG00000028576 Gallus gallus ENSGALG00000028576 I 0.000
PAX9 Gallus gallus ENSGALG00000010114 I 0.000
pax9 Gasterosteus aculeatus ENSGACG00000011298 I 0.000
pax1a Gasterosteus aculeatus ENSGACG00000006987 I 0.000
PAX1 Felis catus ENSFCAG00000004293 I 0.000
PAX1 Cavia porcellus ENSCPOG00000002886 I 0.000
PAX9 Callithrix jacchus ENSCJAG00000016460 I 0.000
EFV54842 Trichinella spiralis EFV54842 I 0.000
DAPPUDRAFT_307722 Daphnia pulex DAPPUDRAFT_307722 I 0.000
CRE05503 Caenorhabditis remanei CRE05503 I 0.000
CJA06788 Caenorhabditis japonica CJA06788 I 0.000
CGI_10005222 Crassostrea gigas CGI_10005222 I 0.000
CBN25998 Caenorhabditis brenneri CBN25998 I 0.000
CBN07010 Caenorhabditis brenneri CBN07010 I 0.000
CapteG64892 Capitella teleta CapteG64892 I 0.000
BGIBMGA000787 Bombyx mori BGIBMGA000787 I 0.000
AGAP001493 Anopheles gambiae AGAP001493 I 0.000
ADAC006866 Anopheles darlingi ADAC006866 I 0.000
ACYPI005583 Acyrthosiphon pisum ACYPI005583 I 0.000
ENSACAG00000001481 Anolis carolinensis ENSACAG00000001481 I 0.000
ENSACAG00000010563 Anolis carolinensis ENSACAG00000010563 I 0.000
PAX1 Callithrix jacchus ENSCJAG00000005773 I 0.000
ENSCING00000024971 Ciona intestinalis ENSCING00000024971 I 0.000
PAX9 Canis familiaris ENSCAFG00000013690 I 0.000
PAX1 Canis familiaris ENSCAFG00000005170 I 0.000
PAX9 Bos taurus ENSBTAG00000009186 I 0.000
PAX1 Bos taurus ENSBTAG00000006742 I 0.000
ENSAPLG00000012856 Anas platyrhynchos ENSAPLG00000012856 I 0.000
ENSAMXG00000018287 Astyanax mexicanus ENSAMXG00000018287 I 0.000
ENSAMXG00000008583 Astyanax mexicanus ENSAMXG00000008583 I 0.000
ENSAMXG00000002161 Astyanax mexicanus ENSAMXG00000002161 I 0.000
ENSAMEG00000012642 Ailuropoda melanoleuca ENSAMEG00000012642 I 0.000
ENSAMEG00000002906 Ailuropoda melanoleuca ENSAMEG00000002906 I 0.000
ACEP27324 Atta cephalotes ACEP27324 I 0.000
ENSSTOG00000015730 Ictidomys tridecemlineatus ENSSTOG00000015730 I 0.000
ENSPPYG00000005755 Pongo abelii ENSPPYG00000005755 I 0.000
ENSPMAG00000010414 Petromyzon marinus ENSPMAG00000010414 I 0.000
ENSPMAG00000010308 Petromyzon marinus ENSPMAG00000010308 I 0.000
ENSPFOG00000017550 Poecilia formosa ENSPFOG00000017550 I 0.000
ENSPFOG00000003208 Poecilia formosa ENSPFOG00000003208 I 0.000
PAX1 Procavia capensis ENSPCAG00000003556 I 0.000
ENSPANG00000008282 Papio anubis ENSPANG00000008282 I 0.000
ENSPANG00000000932 Papio anubis ENSPANG00000000932 I 0.000
pax1 Oryzias latipes ENSORLG00000017412 I 0.000
PAX1 Ochotona princeps ENSOPRG00000017249 I 0.000
ENSONIG00000018717 Oreochromis niloticus ENSONIG00000018717 I 0.000
ENSONIG00000008137 Oreochromis niloticus ENSONIG00000008137 I 0.000
ENSPPYG00000010758 Pongo abelii ENSPPYG00000010758 I 0.000
ENSPSIG00000010961 Pelodiscus sinensis ENSPSIG00000010961 I 0.000
ENSSTOG00000003000 Ictidomys tridecemlineatus ENSSTOG00000003000 I 0.000
ENSSSCG00000016229 Sus scrofa ENSSSCG00000016229 I 0.000
PAX1 Sus scrofa ENSSSCG00000007112 I 0.000
ENSSSCG00000001943 Sus scrofa ENSSSCG00000001943 I 0.000
ENSSHAG00000017556 Sarcophilus harrisii ENSSHAG00000017556 I 0.000
ENSSHAG00000005531 Sarcophilus harrisii ENSSHAG00000005531 I 0.000
PAX9 Sorex araneus ENSSARG00000000337 I 0.000
Pax9 Rattus norvegicus ENSRNOG00000008826 I 0.000
PAX9 Pteropus vampyrus ENSPVAG00000003728 I 0.000
PAX1 Pteropus vampyrus ENSPVAG00000002604 I 0.000
PAX1 Pan troglodytes ENSPTRG00000013311 I 0.000
PAX9 Pan troglodytes ENSPTRG00000006281 I 0.000
ENSONIG00000000990 Oreochromis niloticus ENSONIG00000000990 I 0.000
PAX1 Otolemur garnettii ENSOGAG00000033162 I 0.000
PAX1 Monodelphis domestica ENSMODG00000006198 I 0.000
PAX1 Macaca mulatta ENSMMUG00000019409 I 0.000
PAX9 Macaca mulatta ENSMMUG00000009648 I 0.000
PAX1 Myotis lucifugus ENSMLUG00000014710 I 0.000
PAX9 Myotis lucifugus ENSMLUG00000011407 I 0.000
PAX1 Microcebus murinus ENSMICG00000016968 I 0.000
PAX9 Microcebus murinus ENSMICG00000010808 I 0.000
PAX9 Meleagris gallopavo ENSMGAG00000012530 I 0.000
ENSMEUG00000010140 Macropus eugenii ENSMEUG00000010140 I 0.000
ENSMEUG00000002095 Macropus eugenii ENSMEUG00000002095 I 0.000
ENSLOCG00000016871 Lepisosteus oculatus ENSLOCG00000016871 I 0.000
ENSLOCG00000013992 Lepisosteus oculatus ENSLOCG00000013992 I 0.000
PAX9 Monodelphis domestica ENSMODG00000012681 I 0.000
ENSMPUG00000001187 Mustela putorius furo ENSMPUG00000001187 I 0.000
ENSOGAG00000013131 Otolemur garnettii ENSOGAG00000013131 I 0.000
PAX9 Oryctolagus cuniculus ENSOCUG00000014321 I 0.000
PAX1 Oryctolagus cuniculus ENSOCUG00000003276 I 0.000
ENSOARG00000008050 Ovis aries ENSOARG00000008050 I 0.000
ENSOARG00000004951 Ovis aries ENSOARG00000004951 I 0.000
PAX9 Ornithorhynchus anatinus ENSOANG00000014065 I 0.000
PAX1 Ornithorhynchus anatinus ENSOANG00000002008 I 0.000
ENSNLEG00000010049 Nomascus leucogenys ENSNLEG00000010049 I 0.000
ENSNLEG00000003346 Nomascus leucogenys ENSNLEG00000003346 I 0.000
Pax1 Mus musculus ENSMUSG00000037034 I 0.000
Pax9 Mus musculus ENSMUSG00000001497 I 0.000
ENSMPUG00000016259 Mustela putorius furo ENSMPUG00000016259 I 0.000
PAX9 Loxodonta africana ENSLAFG00000017541 I 0.000
NBR_0002158101 Nippostrongylus brasiliensis NBR_0002158101 N 0.000
TELCIR_18769 Teladorsagia circumcincta TELCIR_18769 N 0.000