TF Information

PGSC0003DMG400015498 *(Solanum tuberosum)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	PGSC0003DMG400015498	T125820_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
IDD1 M06824_2.00	Arabidopsis thaliana	DNTTTTGTCKTTTWBYD	HRVWAAAMGACAAAANH	Dap-seq OMalley et al.(2016) At5g66730_colamp_a	0.798	0.902
IDD1 M06825_2.00	Arabidopsis thaliana	WDTTTTGTCKTTTWNYD	HRNWAAAMGACAAAAHW	Dap-seq OMalley et al.(2016) At5g66730_col	0.798	0.902
IDD5 M06807_2.00	Arabidopsis thaliana	DNTTTTGTCKTTTTSYD	HRSAAAAMGACAAAANH	Dap-seq OMalley et al.(2016) IDD5_colamp_a	0.794	0.878
IDD5 M06808_2.00	Arabidopsis thaliana	WTTTTGTCKTTTWSYD	HRSWAAAMGACAAAAW	Dap-seq OMalley et al.(2016) IDD5_col	0.794	0.878
AT1G14580 M06797_2.00	Arabidopsis thaliana	NNNWWTTTTGTCKTTTWSYD	HRSWAAAMGACAAAAWWNNN	Dap-seq OMalley et al.(2016) At1g14580_col_a	0.794	0.854
AT1G14580 M06798_2.00	Arabidopsis thaliana	NNTTTTGTCKTTTWSYD	HRSWAAAMGACAAAANN	Dap-seq OMalley et al.(2016) At1g14580_colamp_a	0.794	0.854
IDD7 M06803_2.00	Arabidopsis thaliana	NDDTTTTGTCKTTTWBYD	HRVWAAAMGACAAAAHHN	Dap-seq OMalley et al.(2016) IDD7_col_a	0.788	0.878
IDD4 M06809_2.00	Arabidopsis thaliana	WWTTTTGTCKTTTWSYD	HRSWAAAMGACAAAAWW	Dap-seq OMalley et al.(2016) IDD4_col_a	0.788	0.829
MGP M06795_2.00	Arabidopsis thaliana	HNHDWTTTTGTCKTTTWNYD	HRNWAAAMGACAAAAWHDND	Dap-seq OMalley et al.(2016) MGP_col_a	0.788	0.829
MGP M06796_2.00	Arabidopsis thaliana	NNDTTTTGTCKTTTWBYD	HRVWAAAMGACAAAAHNN	Dap-seq OMalley et al.(2016) MGP_colamp_a	0.788	0.829
NUC M06822_2.00	Arabidopsis thaliana	NNNNNTTTTGTCKTYTWBYD	HRVWARAMGACAAAANNNNN	Dap-seq OMalley et al.(2016) NUC_col_a	0.765	0.805
NUC M06823_2.00	Arabidopsis thaliana	NDTTTTGTCGTYTWNYD	HRNWARACGACAAAAHN	Dap-seq OMalley et al.(2016) NUC_colamp_a	0.765	0.805
JKD M06818_2.00	Arabidopsis thaliana	HHNWWTTTTGTCKTTTWBYD	HRVWAAAMGACAAAAWWNDD	Dap-seq OMalley et al.(2016) JKD_col_a	0.759	0.854
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
PGSC0003DMT400040063	C2H2 ZF	132	153	WKCDKCSKKYAVQSDLKAHLKI
PGSC0003DMT400040063	C2H2 ZF	154	178	CGTKEYKCDCGTMFSRRDSFITHRA
PGSC0003DMT400040064	C2H2 ZF	132	153	WKCDKCSKKYAVQSDLKAHLKI
PGSC0003DMT400040064	C2H2 ZF	154	178	CGTKEYKCDCGTMFSRRDSFITHRA

Links
Other C2H2 ZF family TFs
Other *Solanum tuberosum* TFs

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661 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action

PGSC0003DMG400015498 (Solanum tuberosum) C2H2 ZF

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

661 Related TFs

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PGSC0003DMG400015498 **(Solanum tuberosum)
C2H2 ZF**