CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PGSC0003DMG400027241
(
Solanum tuberosum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PGSC0003DMG400027241
T125841_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400070044
C2H2 ZF
216
238
PCPQCHLRFSTVRALIDHVQKVH
PGSC0003DMT400070044
C2H2 ZF
249
272
DVCPRCSKGFRDPVALVEHVEREH
PGSC0003DMT400070045
C2H2 ZF
195
217
PCPQCHLRFSTVRALIDHVQKVH
PGSC0003DMT400070045
C2H2 ZF
228
251
DVCPRCSKGFRDPVALVEHVEREH
Links
Other
C2H2 ZF
family TFs
Other
Solanum tuberosum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc04g015570.2
Solanum lycopersicum
Solyc04g015570.2
N
0.827