CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra76419
(
Phytophthora ramorum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Phyra76419
T126274_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra76419
C2H2 ZF
34
58
FQCPDVRCGRRFNRKYTLTEHMKTH
Phyra76419
C2H2 ZF
64
88
HVCRARGCGKRFSTSGNLSRHMRLH
Phyra76419
C2H2 ZF
95
118
DCPVKGCTCKFMSDIKLAKHMRSH
Phyra76419
C2H2 ZF
124
149
HTCKVPACGKSFSTTGNLNRHLKNQH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora ramorum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.9724
Phytophthora lateralis
fgenesh_scip_prom.28083.9724
N
0.815
Physo128920
Phytophthora sojae
Physo128920
N
0.810
HpaG801336
Hyaloperonospora arabidopsidis
HpaG801336
N
0.809
F443_10159
Phytophthora parasitica
F443_10159
N
0.807
fgenesh_scip_prom.46568.3727
Phytophthora kernoviae
fgenesh_scip_prom.46568.3727
N
0.801