Phyra76486 (Phytophthora ramorum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Phyra76486 T126280_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Phyra76486
M01182_2.00		 Phytophthora ramorum
NRWKCHNN
NNDGMWYN		 PBM
Lambert et al.(2019)
pTH11170		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01182_2.00 C2H2 ZF 39 61
M01182_2.00 C2H2 ZF 67 91
M01182_2.00 C2H2 ZF 98 122
M01182_2.00 C2H2 ZF 129 153

DNA Binding Domains

Protein ID Domain From To Sequence
Phyra76486 C2H2 ZF 39 61
Phyra76486 C2H2 ZF 67 91
Phyra76486 C2H2 ZF 98 122
Phyra76486 C2H2 ZF 129 153

Links

Other C2H2 ZF family TFs
Other Phytophthora ramorum TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh_scip_prom.28083.7632 Phytophthora lateralis fgenesh_scip_prom.28083.7632 I 0.827
Physo137937 Phytophthora sojae Physo137937 I 0.812
HpaG801423 Hyaloperonospora arabidopsidis HpaG801423 I 0.802
F443_09524 Phytophthora parasitica F443_09524 I 0.797
estExt_fgenesh1_kg.C_70642 Phytophthora capsici estExt_fgenesh1_kg.C_70642 I 0.794
fgenesh_scip_prom.46568.9158 Phytophthora kernoviae fgenesh_scip_prom.46568.9158 I 0.790
PITG_01387 Phytophthora infestans PITG_01387 I 0.787