CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Physo128284
(
Phytophthora sojae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Physo128284
T126294_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Physo128284
C2H2 ZF
92
116
HVCTNAECGKSFDSKWALIRHIRVH
Physo128284
C2H2 ZF
122
146
FPCTFPSCDKSFAEKSAMTRHLQTH
Physo128284
C2H2 ZF
152
176
YKCTYADCSKSFKGKDYLEFHLKIH
Physo128284
C2H2 ZF
182
207
YACDHPTCSKTFCSPKSLKKHIRLWH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora sojae
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_19094
Phytophthora parasitica
F443_19094
N
0.822
PITG_02480
Phytophthora infestans
PITG_02480
N
0.822
fgenesh_scip_prom.28083.11122
Phytophthora lateralis
fgenesh_scip_prom.28083.11122
N
0.822
Phyra77610
Phytophthora ramorum
Phyra77610
N
0.822
PYU1_G004510
Pythium ultimum
PYU1_G004510
N
0.813
snap_masked-pir_contig_42-abinit-gene-0.59
Pythium irregulare
snap_masked-pir_contig_42-abinit-gene-0.59
N
0.810
maker-pve_contig_417-snap-gene-0.20
Pythium vexans
maker-pve_contig_417-snap-gene-0.20
N
0.791
maker-piw_contig_198-snap-gene-0.25
Pythium iwayamai
maker-piw_contig_198-snap-gene-0.25
N
0.785