CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PMAA_059470
(
Talaromyces marneffei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PMAA_059470
T126712_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_01877
M01175_2.00
Fusarium graminearum
NNNRGCTGNN
NNCAGCYNNN
PBM
Lambert et al.(2019)
pTH10260
0.811
0.917
NCU03699
M01878_2.00
Neurospora crassa
NNVRGCTGDN
NHCAGCYBNN
PBM
Weirauch et al.(2014)
pTH8956
0.810
0.917
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEA22168
C2H2 ZF
274
294
RCPWPDCGRSFKDLKAHMLTH
EEA22168
C2H2 ZF
301
327
KCPILNCEYHLKGFARKYDKNRHTLTH
EEA22168
C2H2 ZF
332
362
MVCGFCPGSGSAAEKSFNRADVFKRHLMSVH
EEA22168
C2H2 ZF
397
416
KCSTCSATFSNAQDFYEHLD
Links
Other
C2H2 ZF
family TFs
Other
Talaromyces marneffei
TFs
88 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy