CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PPA19930
(
Pristionchus pacificus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PPA19930
T127066_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA19930
C2H2 ZF
444
465
MECPTCGLVLYRHNFATHYRIH
PPA19930
C2H2 ZF
471
493
FPCSYCEKRFRSTSALKVHTRAH
PPA19930
C2H2 ZF
499
522
YKCPSCDYAALTKRNLDRHIMNNH
Links
Other
C2H2 ZF
family TFs
Other
Pristionchus pacificus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold561-EXSNAP2012.9
Pristionchus exspectatus
scaffold561-EXSNAP2012.9
N
0.821
DME_0000558601
Dracunculus medinensis
DME_0000558601
N
0.758
ASU_06946
Ascaris suum
ASU_06946
N
0.758
ALUE_0001410701
Ascaris lumbricoides
ALUE_0001410701
N
0.758