PPA20237 (Pristionchus pacificus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PPA20237 T127067_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
bcl-11
M00641_2.00
Caenorhabditis elegans
NNTGACCRNN

NNYGGTCANN
PBM
Narasimhan et al.(2015)
pTH10807
0.804 0.910
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA20237 C2H2 ZF 342 363
PPA20237 C2H2 ZF 369 391
PPA20237 C2H2 ZF 399 420

Links

Other C2H2 ZF family TFs
Other Pristionchus pacificus TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCAN_24528 Ancylostoma caninum ANCCAN_24528 I 0.772
ANCCEY_05532 Ancylostoma ceylanicum ANCCEY_05532 I 0.772
ANCDUO_15498 Ancylostoma duodenale ANCDUO_15498 I 0.765
ASIM_0001463201 Anisakis simplex ASIM_0001463201 I 0.797
ASU_10535 Ascaris suum ASU_10535 I 0.804
Bm3354 Brugia malayi Bm3354 I 0.800
BXY_0383300 Bursaphelenchus xylophilus BXY_0383300 I 0.785
CBG18919 Caenorhabditis briggsae CBG18919 I 0.804
CBN13459 Caenorhabditis brenneri CBN13459 I 0.804
CJA41396 Caenorhabditis japonica CJA41396 I 0.804
CRE30875 Caenorhabditis remanei CRE30875 I 0.804
D917_09068 Trichinella nativa D917_09068 I 0.798
D918_08675 Trichuris suis D918_08675 I 0.798
DICVIV_00143 Dictyocaulus viviparus DICVIV_00143 I 0.765
DME_0000006201 Dracunculus medinensis DME_0000006201 I 0.804
EFV59674 Trichinella spiralis EFV59674 I 0.798
EVEC_0001125701 Enterobius vermicularis EVEC_0001125701 I 0.797
GPLIN_001288500 Globodera pallida GPLIN_001288500 I 0.792
HCOI00904800 Haemonchus contortus HCOI00904800 I 0.768
HCOI01698200 Haemonchus contortus HCOI01698200 I 0.768
HPLM_0001331501 Haemonchus placei HPLM_0001331501 I 0.768
L596_g14520 Steinernema carpocapsae L596_g14520 I 0.804
L889_g19350 Steinernema feltiae L889_g19350 I 0.804
L892_g10848 Steinernema scapterisci L892_g10848 I 0.804
L898_g13372 Steinernema monticolum L898_g13372 I 0.804
LOAG_18740 Loa loa LOAG_18740 I 0.800
MhA1_Contig454.frz3.fgene1 Meloidogyne hapla MhA1_Contig454.frz3.fgene1 I 0.784
Minc07594 Meloidogyne incognita Minc07594 I 0.784
nAv.1.0.1.g03797 Acanthocheilonema viteae nAv.1.0.1.g03797 I 0.800
nDi.2.2.2.g00707 Dirofilaria immitis nDi.2.2.2.g00707 I 0.800
NECAME_02245 Necator americanus NECAME_02245 I 0.765
nLs.2.1.2.g09142 Litomosoides sigmodontis nLs.2.1.2.g09142 I 0.800
nOo.2.0.1.g03888 Onchocerca ochengi nOo.2.0.1.g03888 I 0.797
OFLC_0000354401 Onchocerca flexuosa OFLC_0000354401 I 0.800
PTRK_0001160400 Parastrongyloides trichosuri PTRK_0001160400 I 0.808
RSKR_0000889800 Rhabditophanes kr3021 RSKR_0000889800 I 0.804
SBAD_0000338201 Soboliphyme baturini SBAD_0000338201 I 0.787
scaffold248-EXSNAP2012.2 Pristionchus exspectatus scaffold248-EXSNAP2012.2 I 0.827
SMUV_0000624601 Syphacia muris SMUV_0000624601 I 0.797
SPAL_0001358300 Strongyloides papillosus SPAL_0001358300 I 0.808
SSTP_0000584500 Strongyloides stercoralis SSTP_0000584500 I 0.808
SVE_0953600 Strongyloides venezuelensis SVE_0953600 I 0.808
TCNE_0001279201 Toxocara canis TCNE_0001279201 I 0.804
TELCIR_04334 Teladorsagia circumcincta TELCIR_04334 I 0.765
TELCIR_24378 Teladorsagia circumcincta TELCIR_24378 I 0.765
TMUE_s0041001100 Trichuris muris TMUE_s0041001100 I 0.798
bcl-11 Caenorhabditis elegans WBGene00017430 D 0.804
WBGene00244008 Onchocerca volvulus WBGene00244008 I 0.797
WUBG_02612 Wuchereria bancrofti WUBG_02612 I 0.800