Ppa-ztf-19 (Pristionchus pacificus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PPA23683 T127099_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pat-9
M00620_2.00 		Caenorhabditis elegans
NDKTKTAAHN
NDTTAMAMHN		 PBM
Narasimhan et al.(2015)
pTH10808 		0.815 0.891
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA23683 C2H2 ZF 142 164
PPA23683 C2H2 ZF 170 192

Links

Other C2H2 ZF family TFs
Other Pristionchus pacificus TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold450-EXSNAP2012.3 Pristionchus exspectatus scaffold450-EXSNAP2012.3 I 0.827
HCOI01651000 Haemonchus contortus HCOI01651000 I 0.821
DICVIV_12412 Dictyocaulus viviparus DICVIV_12412 I 0.821
HPBE_0000071201 Heligmosomoides bakeri HPBE_0000071201 I 0.821
OESDEN_00376 Oesophagostomum dentatum OESDEN_00376 I 0.821
TELCIR_02513 Teladorsagia circumcincta TELCIR_02513 I 0.821
ANCDUO_07563 Ancylostoma duodenale ANCDUO_07563 I 0.821
Hba_14230 Heterorhabditis bacteriophora Hba_14230 I 0.821
ANCCAN_18583 Ancylostoma caninum ANCCAN_18583 I 0.821
ACOC_0000102201 Angiostrongylus costaricensis ACOC_0000102201 I 0.821
CJA18352 Caenorhabditis japonica CJA18352 I 0.815
CRE27649 Caenorhabditis remanei CRE27649 I 0.815
CBG16356 Caenorhabditis briggsae CBG16356 I 0.815
pat-9 Caenorhabditis elegans WBGene00003933 D 0.815
BXY_0112400 Bursaphelenchus xylophilus BXY_0112400 I 0.815
CBN24586 Caenorhabditis brenneri CBN24586 I 0.815
RSKR_0001095800 Rhabditophanes kr3021 RSKR_0001095800 I 0.809
GPLIN_000449900 Globodera pallida GPLIN_000449900 I 0.791
MhA1_Contig1798.frz3.fgene1 Meloidogyne hapla MhA1_Contig1798.frz3.fgene1 I 0.791
genemark-nMf.1.1.scaf00221-processed-gene-0.5 Meloidogyne floridensis genemark-nMf.1.1.scaf00221-processed-gene-0.5 I 0.791
SSTP_0001017800 Strongyloides stercoralis SSTP_0001017800 I 0.790
SVE_0378000 Strongyloides venezuelensis SVE_0378000 I 0.790
PTRK_0000759200 Parastrongyloides trichosuri PTRK_0000759200 I 0.790
SPAL_0001716000 Strongyloides papillosus SPAL_0001716000 I 0.790
TCLT_0000966901 Thelazia callipaeda TCLT_0000966901 I 0.786
nLs.2.1.2.g04320 Litomosoides sigmodontis nLs.2.1.2.g04320 I 0.786
EVEC_0000241401 Enterobius vermicularis EVEC_0000241401 I 0.786
WBGene00238928 Onchocerca volvulus WBGene00238928 I 0.786
nOo.2.0.1.g07915 Onchocerca ochengi nOo.2.0.1.g07915 I 0.786
SMUV_0001033801 Syphacia muris SMUV_0001033801 I 0.781